RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 MPZP25189 248 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 ERP29P30040 261 aaKnown RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 KDELR2P33947 212 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 BMI1P35226 326 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 CHRNA7P36544 502 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 OPRL1P41146 370 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 OR3A1P47881 315 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 NPBWR2P48146 333 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 SNU13P55769 128 aaKnown RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 RAB40BQ12829 278 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 LTC4SQ16873 150 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 C17orf58Q2M2W7 97 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 TEX30Q5JUR7 227 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 KRT74Q7RTS7 529 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 BCDIN3DQ7Z5W3 292 aaKnown RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 RNF148Q8N7C7 305 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 GVQW1Q8N7I0 195 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 HAVCR2Q8TDQ0 301 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 TSEN15Q8WW01 171 aaKnown RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 CORO2AQ92828 525 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 MUL1Q969V5 352 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 SLAMF9Q96A28 289 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 CEP19Q96LK0 163 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 DPCDQ9BVM2 203 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 SLC2A8Q9NY64 477 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 MTCH1Q9NZJ7 389 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 FBXL17Q9UF56 701 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 ENPP5Q9UJA9 477 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF580Q9UK33 172 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 TRBV4-1A0A0J9YWV2 114 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 FAM230AA0A1W2PPH8 454 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ODAMA1E959 279 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 MSGN1A6NI15 193 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 A6NIN4 97 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF729A6NN14 1252 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 SIRPB1O00241 398 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 RGS10O43665 173 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 IDH3BO43837 385 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF682O95780 498 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 GAPDHP04406 335 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 IFNA4P05014 189 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 H1F0P07305 194 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 CSN3P07498 182 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 CLUP10909 449 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 H2AFXP16104 143 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ZP3P21754 424 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 SYNJ2BPP57105 145 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 NANOS2P60321 138 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF91Q05481 1191 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF816Q0VGE8 651 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 BNIP1Q12981 228 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 IL24Q13007 206 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 EPGNQ6UW88 154 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ERI1Q8IV48 349 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 SPARTQ8N0X7 666 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 TMEM217Q8N7C4 229 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ANKRD42Q8N9B4 389 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 MINDY2Q8NBR6 621 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 SLC37A3Q8NCC5 494 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 OR52J3Q8NH60 311 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 C2CD4CQ8TF44 421 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 EMG1Q92979 244 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 MS4A10Q96PG2 267 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 EBF4Q9BQW3 602 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 GGTLC1Q9BX51 225 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 DGCR6LQ9BY27 220 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 CADM1Q9BY67 442 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 PKIBQ9C010 78 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 ANKRD19PQ9H560 264 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 DCAF13Q9NV06 445 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 CD300AQ9UGN4 299 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 MRM2Q9UI43 246 aaKnown RBP3.96□□□□□ -1.78
PTPN4-210ENST00000485247 A3GALT2U3KPV4 340 aa3.96□□□□□ -1.78
PTPN4-210ENST00000485247 PKD1P98161 4303 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 LOC102724200A0A096LPH7 203 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 IGHV7-81A0A0B4J1V7 117 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 KBTBD11-OT1A0A1B0GTJ5 212 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 A0A1W2PRQ8 180 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 FUOMA2VDF0 154 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 AQP12BA6NM10 295 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 IGLL5B9A064 214 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 ARPC1BO15143 372 aaKnown RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 SPRY2O43597 315 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 MITFO75030 526 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 INAFM2P0DMQ5 153 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 SPI1P17947 270 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 CD1BP29016 333 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 BLVRBP30043 206 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 TPPP2P59282 170 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 KLF5Q13887 457 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 DGCR6Q14129 220 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 RBMS2Q15434 407 aaKnown RBP3.95□□□□□ -1.78
PTPN4-210ENST00000485247 MMDQ15546 238 aa3.95□□□□□ -1.78
PTPN4-210ENST00000485247 GUCA2BQ16661 112 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms