RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	CCDC171	Q6TFL3	1326 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	CELSR3	Q9NYQ7	3312 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	VWA8	A3KMH1	1905 aa		4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	RIF1	Q5UIP0	2472 aa	Known RBP	4.11	□□□□□ -1.75
UBR3-210	ENST00000484596	PDCD11	Q14690	1871 aa	Known RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	IGKV1-27	A0A075B6S5	117 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	FAM240A	A0A1B0GVK7	77 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596		F8VP50	259 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596		H0YJX3	145 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	MYL12B	O14950	172 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	TRBV12-3	P01733	135 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	PRB2	P02812	416 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	FABP1	P07148	127 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CFL1	P23528	166 aa	Known RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CXCR1	P25024	350 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	HSD11B1	P28845	292 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	APLNR	P35414	380 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	PCK1	P35558	622 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CAPZB	P47756	277 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	TGM4	P49221	684 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	RPL14	P50914	215 aa	Known RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	LOXL1	Q08397	574 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	INCA1	Q0VD86	236 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	C16orf72	Q14CZ0	275 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	PDK2	Q15119	407 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	ACTL10	Q5JWF8	245 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	MDP1	Q86V88	176 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CRLF3	Q8IUI8	442 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	OR1J4	Q8NGS1	313 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	OR6N1	Q8NGY5	312 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	OR52P1P	Q8NH57	321 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	OR1S1	Q8NH92	325 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	PPTC7	Q8NI37	304 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CDS1	Q92903	461 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	ADTRP	Q96IZ2	230 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNF488	Q96MN9	340 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	MBOAT7	Q96N66	472 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	GGTLC1	Q9BX51	225 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CENPH	Q9H3R5	247 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM100	Q9NV29	134 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	ZNRD1	Q9P1U0	126 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	RAB23	Q9ULC3	237 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	SIGLEC7	Q9Y286	467 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	FADS3	Q9Y5Q0	445 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	ABCB11	O95342	1321 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	CEP250	Q9BV73	2442 aa		4.1	□□□□□ -1.75
UBR3-210	ENST00000484596	OTOGL	Q3ZCN5	2332 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596		M0R1B8	84 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	ENSA	O43768	121 aa	Known RBP	4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	MED6	O75586	246 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	GLS	O94925	669 aa	Predicted RBP	4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TNFAIP8	O95379	198 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	LDOC1	O95751	146 aa	Predicted RBP	4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	IL6	P05231	212 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	KRT7	P08729	469 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	PRPS1L1	P21108	318 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	PRLHR	P49683	370 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	XK	P51811	444 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	PFN3	P60673	137 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	CXCR4	P61073	352 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	SYCN	Q0VAF6	134 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TSPAN31	Q12999	210 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TPBG	Q13641	420 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	C6orf99	Q4VX62	202 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM236	Q5W0B7	351 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	OPN5	Q6U736	354 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	NTM-AS1	Q6ZSK4	140 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	SSX6	Q7RTT6	188 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	SLC16A13	Q7RTY0	426 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TMEM25	Q86YD3	366 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	NECAP1	Q8NC96	275 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	ACTL9	Q8TC94	416 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	DTD1	Q8TEA8	209 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	GHSR	Q92847	366 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	CMTM5	Q96DZ9	223 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TMA16	Q96EY4	203 aa	Known RBP	4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	KCNS1	Q96KK3	526 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	PACRG	Q96M98	296 aa	Predicted RBP	4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	TIMM29	Q9BSF4	260 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	SFXN3	Q9BWM7	321 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	FGF23	Q9GZV9	251 aa	Predicted RBP	4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	HEBP1	Q9NRV9	189 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	MAT2B	Q9NZL9	334 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	AP3M1	Q9Y2T2	418 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	WIF1	Q9Y5W5	379 aa		4.09	□□□□□ -1.75
UBR3-210	ENST00000484596	ANK1	P16157	1881 aa		4.09	□□□□□ -1.76
UBR3-210	ENST00000484596	IGKV2D-24	A0A075B6R9	120 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	GOLGA6L10	A6NI86	522 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	C5orf67	F2Z3F1	127 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	hCG_2039718	K7EN88	272 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	MANBA	O00462	879 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	ZNF593	O00488	134 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	PSPHP1	O15172	72 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	SOCS1	O15524	211 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	CHST10	O43529	356 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	SGCE	O43556	437 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	SERPINB7	O75635	380 aa		4.08	□□□□□ -1.76
UBR3-210	ENST00000484596	DEXI	O95424	95 aa		4.08	□□□□□ -1.76

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