RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RSBN1Q5VWQ0 802 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-213ENST00000484112 ZNF626Q68DY1 528 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 TRAT1Q6PIZ9 186 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 ZNF554Q86TJ5 538 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 PNKDQ8N490 385 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 ZNF596Q8TC21 504 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MALSU1Q96EH3 234 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 COQ2Q96H96 371 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 Q96M66 194 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 TM2D1Q9BX74 207 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 SELENOIQ9C0D9 397 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MEGF9Q9H1U4 602 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 PPIL3Q9H2H8 161 aaKnown RBP8.1□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM133Q9H2Q1 129 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 STUB1Q9UNE7 303 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MINOS1-NBL1R4GNA1 71 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 V9GY05 133 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 TET2Q6N021 2002 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MEIKINA0A087WXM9 373 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 VGLL3A8MV65 326 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM14DPA8MWL7 114 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 ODF3BA8MYP8 253 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM127O75204 238 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 CGB3P0DN86 165 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 CGB7P0DN87 165 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 VSIG8P0DPA2 414 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 ARSBP15848 533 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 LOXL3P58215 753 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 RPS27AP62979 156 aaKnown RBP8.09□□□□□ -1.11
CPSF4-213ENST00000484112 LY6EQ16553 131 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 Q3ZCU0 254 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 OXLD1Q5BKU9 147 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 ATAD3CQ5T2N8 411 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 KPRPQ5T749 579 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-213ENST00000484112 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 TPRA1Q86W33 373 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 LYG1Q8N1E2 194 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 GAPTQ8N292 157 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 TPRX1Q8N7U7 411 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 DTX3Q8N9I9 347 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 URM1Q9BTM9 101 aaKnown RBP8.09□□□□□ -1.11
CPSF4-213ENST00000484112 CLEC7AQ9BXN2 247 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM59Q9BXS4 323 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 PLGRKTQ9HBL7 147 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 SCOCQ9UIL1 159 aa8.09□□□□□ -1.11
CPSF4-213ENST00000484112 IGHV2-26A0A0B4J1V2 119 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 A0A1W2PP11 408 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 A6NHS1 94 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 NPIPB11E5RHQ5 1161 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 H3BUX3 64 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 ORC5O43913 435 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 PDCD6O75340 191 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 IL1AP01583 271 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 VSIG10L2P0DP72 767 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 CDK2P24941 298 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 DYNLT3P51808 116 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 ARHGDIBP52566 201 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 PRRX1P54821 245 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 QRFPP83859 136 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 RAB11BQ15907 218 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 TIMM50Q3ZCQ8 353 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 C6orf183Q5T699 404 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 RAB12Q6IQ22 244 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 ZNF497Q6ZNH5 498 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 KLHDC1Q8N7A1 406 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 TMEM104Q8NE00 496 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 TSPAN14Q8NG11 270 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 OR52M1Q8NGK5 317 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 PTX4Q96A99 478 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 RIMS4Q9H426 269 aaPredicted RBP8.08□□□□□ -1.12
CPSF4-213ENST00000484112 STEAP1Q9UHE8 339 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 KIF25Q9UIL4 384 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 SSR3Q9UNL2 185 aa8.08□□□□□ -1.12
CPSF4-213ENST00000484112 AK6Q9Y3D8 172 aaKnown RBP8.08□□□□□ -1.12
CPSF4-213ENST00000484112 OOSP1A8MZH6 123 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 AIPO00170 330 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 HSPB6O14558 160 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 MPIG6BO95866 241 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 MT-ND4P03905 459 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 ARG1P05089 322 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 RAB3BP20337 219 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 CEACAM3P40198 252 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 GLP1RP43220 463 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 SCAND1P57086 179 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 C17orf58Q2M2W7 97 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 NSUN5P1Q3KNT7 163 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 ZNF782Q6ZMW2 699 aaPredicted RBP8.07□□□□□ -1.12
CPSF4-213ENST00000484112 ABHD12Q8N2K0 398 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 FAM89BQ8N5H3 189 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 C8orf31Q8N9H6 132 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 PLPPR1Q8TBJ4 325 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 NEK7Q8TDX7 302 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 KCTD7Q96MP8 289 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 NEDD4LQ96PU5 975 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 GFI1Q99684 422 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 NKX3-1Q99801 234 aaPredicted RBP8.07□□□□□ -1.12
CPSF4-213ENST00000484112 SSX3Q99909 188 aa8.07□□□□□ -1.12
CPSF4-213ENST00000484112 BANF2Q9H503 90 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms