RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 WNT2P09544 360 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 GLRA1P23415 457 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 NFYAP23511 347 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 CD34P28906 385 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 CHRNB4P30926 498 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 GLP1RP43220 463 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 NPY4RP50391 375 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 ASCL1P50553 236 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 H2BFSP57053 126 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 IKZF1Q13422 519 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 PPP1R1AQ13522 171 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 NDUFA5Q16718 116 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 LAMTOR1Q6IAA8 161 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 WDR82Q6UXN9 313 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 ACP7Q6ZNF0 438 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 KCTD9Q7L273 389 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 RTN4RL2Q86UN3 420 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 SGPP2Q8IWX5 399 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 DMRTC2Q8IXT2 367 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 LRTM2Q8N967 370 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 UXS1Q8NBZ7 420 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 RELL2Q8NC24 303 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 OR52B4Q8NGK2 314 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 LILRB4Q8NHJ6 448 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 COQ8AQ8NI60 647 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 Q8TCH9 128 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 FAM216AQ8WUB2 273 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 CAPSLQ8WWF8 208 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 MRPL24Q96A35 216 aaKnown RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 MOB3AQ96BX8 217 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 GALNT14Q96FL9 552 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 HS3ST6Q96QI5 342 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF2Q9BSG1 426 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 RSRP1Q9BUV0 290 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 TOLLIPQ9H0E2 274 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 WDR13Q9H1Z4 485 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 RAB18Q9NP72 206 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 MBNL3Q9NUK0 354 aaKnown RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 IL19Q9UHD0 177 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 DUSP13Q9UII6 198 aa4.56□□□□□ -1.68
COL17A1-206ENST00000483876 C14orf166Q9Y224 244 aaKnown RBP4.56□□□□□ -1.68
COL17A1-206ENST00000483876 SVEP1Q4LDE5 3571 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 TRBV6-7A0A0A0MS04 114 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 DPRXA6NFQ7 191 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 CRYM-AS1A6NIL9 109 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 RFPL4AA6NLU0 287 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SRRM5B3KS81 715 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 RFPL4AL1F8VTS6 287 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 G3V3Q6 166 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 HS3ST1O14792 307 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 NXPH2O95156 264 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 OR2H2O95918 312 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 HAND1O96004 215 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 THBDP07204 575 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 GRPP07492 148 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF728P0DKX0 622 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SLC25A4P12235 298 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF44P15621 663 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 RPS2P15880 293 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 AKR1C4P17516 323 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 EGR1P18146 543 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 TNFSF4P23510 183 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 FCGR2CP31995 323 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 CCKARP32238 428 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 NKX2-5P52952 324 aaPredicted RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 RND3P61587 244 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SUPT4H1P63272 117 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SRPXP78539 464 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SORDQ00796 357 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 IFITM2Q01629 132 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 PDCD1Q15116 288 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 MSMO1Q15800 293 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 CR1LQ2VPA4 569 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SMIM21Q3B7S5 101 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ESCO2Q56NI9 601 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 PAN3Q58A45 887 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 FAM209AQ5JX71 171 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 LY6G6FQ5SQ64 297 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SLC35E4Q6ICL7 350 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 BRICD5Q6PL45 260 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 SLC22A25Q6T423 547 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF497Q6ZNH5 498 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 C22orf34Q6ZV56 151 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 LDLRAD3Q86YD5 345 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 C9orf62Q8N4C0 152 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ASCC1Q8N9N2 400 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ADAD2Q8NCV1 583 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 OR11H4Q8NGC9 324 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 OR5M8Q8NGP6 311 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 GRPEL2Q8TAA5 225 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 PPP1R35Q8TAP8 253 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 MRPL30Q8TCC3 161 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 DYRK2Q92630 601 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 RNASE6Q93091 150 aaKnown RBP4.55□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM230Q96A57 120 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 AKR1E2Q96JD6 320 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF488Q96MN9 340 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 WFIKKN1Q96NZ8 548 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM246Q9BRR3 403 aa4.55□□□□□ -1.68
COL17A1-206ENST00000483876 HDHD3Q9BSH5 251 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms