RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 LIN54Q6MZP7 749 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 C11orf88Q6PI97 169 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 LDLRAD3Q86YD5 345 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 SGPP2Q8IWX5 399 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 OR5T2Q8NGG2 359 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 COQ8AQ8NI60 647 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 ANGPTL6Q8NI99 470 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 NEUROG1Q92886 237 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 TOMM40LQ969M1 308 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 TMEM204Q9BSN7 226 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 PLCE1Q9P212 2302 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 DYSFO75923 2080 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 ITPR1Q14643 2758 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 TUBAL3A6NHL2 446 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 M0R233 179 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 SNAPC5O75971 98 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 IFNA2P01563 188 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 TFF1P04155 84 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 AGAP20933 346 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 TLE1Q04724 770 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 LGALSLQ3ZCW2 172 aaPredicted RBP11.75□□□□□ -0.53
CLK3-204ENST00000483723 TEX36Q5VZQ5 186 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 KCTD9Q7L273 389 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 FAM185AQ8N0U4 392 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 ZNF808Q8N4W9 903 aaPredicted RBP11.75□□□□□ -0.53
CLK3-204ENST00000483723 OR11L1Q8NGX0 322 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 NCOR1P1Q9H4R4 102 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 NAA60Q9H7X0 242 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 TAF9BQ9HBM6 251 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 DNAJB11Q9UBS4 358 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
CLK3-204ENST00000483723 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 IGKV1D-13A0A0B4J2D9 117 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 OOEPA6NGQ2 149 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 DEFB108AA8MXU0 73 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 B9A039 149 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 PLAUP00749 431 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 IGKV1-13P0DP09 117 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 AESQ08117 197 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 PPP1R35Q8TAP8 253 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 RTN4IP1Q8WWV3 396 aaPredicted RBP11.74□□□□□ -0.53
CLK3-204ENST00000483723 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 KIRREL1Q96J84 757 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 LURAP1Q96LR2 239 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 PPP1R3CQ9UQK1 317 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 KCNIP3Q9Y2W7 256 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 ATRXP46100 2492 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 ZFYVE26Q68DK2 2539 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 TEX13DA0A0J9YY54 714 aaPredicted RBP11.74□□□□□ -0.53
CLK3-204ENST00000483723 HMSDA8MTL9 139 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 K7N7A8 449 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 RGS13O14921 159 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 MUC1P15941 1255 aaPredicted RBP11.74□□□□□ -0.53
CLK3-204ENST00000483723 TMEM187Q14656 261 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 SWI5Q1ZZU3 235 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 ABCA11PQ4W5N1 156 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 STUMQ69YW2 141 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 LRTM2Q8N967 370 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
CLK3-204ENST00000483723 CCDC71LQ8N9Z2 235 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 TMEM246Q9BRR3 403 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 SUCNR1Q9BXA5 334 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 EGLN1Q9GZT9 426 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 KCNIP1Q9NZI2 227 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 HSPB11Q9Y547 144 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 MAB21L2Q9Y586 359 aa11.74□□□□□ -0.53
CLK3-204ENST00000483723 DSCAMO60469 2012 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 ICE1Q9Y2F5 2266 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 TRAV14DV4A0A0A6YYC5 116 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 GPR31O00270 319 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 CCSO14618 274 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 MGST3O14880 152 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 CYB5R3P00387 301 aaPredicted RBP11.73□□□□□ -0.53
CLK3-204ENST00000483723 GNLYP22749 145 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 CD80P33681 288 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 GLIPR1P48060 266 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 CCL8P80075 99 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 FAM201AQ5SY85 155 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 GSG1LQ6UXU4 331 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 ASCC1Q8N9N2 400 aaKnown RBP11.73□□□□□ -0.53
CLK3-204ENST00000483723 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 SLC5A7Q9GZV3 580 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 CISD1Q9NZ45 108 aaKnown RBP11.73□□□□□ -0.53
CLK3-204ENST00000483723 SPTA1P02549 2419 aa11.73□□□□□ -0.53
CLK3-204ENST00000483723 C12orf77C9JDV5 145 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 MPPED1O15442 326 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 WNT2P09544 360 aa11.72□□□□□ -0.53
CLK3-204ENST00000483723 GABRA2P47869 451 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms