RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 FAM118AQ9NWS6 357 aa10.91□□□□□ -0.66
VARS-226ENST00000483275 SLC31A2O15432 143 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 HTR3BO95264 441 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 DBTP11182 482 aaKnown RBP10.9□□□□□ -0.66
VARS-226ENST00000483275 RSU1Q15404 277 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 KCTD20Q7Z5Y7 419 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 Q8N6K4 173 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 Q8N9W7 124 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 SUMF2Q8NBJ7 301 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 HAVCR2Q8TDQ0 301 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 CCDC107Q8WV48 283 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 CYGBQ8WWM9 190 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 CYYR1Q96J86 154 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 DPCDQ9BVM2 203 aaPredicted RBP10.9□□□□□ -0.66
VARS-226ENST00000483275 LINC00574Q9H8X3 128 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 RHOFQ9HBH0 211 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 DHDHQ9UQ10 334 aa10.9□□□□□ -0.66
VARS-226ENST00000483275 LSM4Q9Y4Z0 139 aaKnown RBP10.9□□□□□ -0.66
VARS-226ENST00000483275 SEC14L6B5MCN3 397 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 AP4M1O00189 453 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 GPR50Q13585 617 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 CXorf66Q5JRM2 361 aaPredicted RBP10.89□□□□□ -0.67
VARS-226ENST00000483275 TTC23Q5W5X9 447 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 ELP2Q6IA86 826 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 TEX38Q6PEX7 206 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 PARP16Q8N5Y8 322 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 OR5D14Q8NGL3 314 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 OR5AK2Q8NH90 309 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 ORAI1Q96D31 301 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 BARHL1Q9BZE3 327 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 AMBNQ9NP70 447 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
VARS-226ENST00000483275 SORL1Q92673 2214 aa10.89□□□□□ -0.67
VARS-226ENST00000483275 A0A1W2PP11 408 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 SDCBPO00560 298 aaPredicted RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 OR7C1O76099 320 aaPredicted RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 GAPDHP04406 335 aaKnown RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 SLC6A1P30531 599 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 GTF2A1P52655 376 aaPredicted RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 ZNF816Q0VGE8 651 aaPredicted RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 DCTN2Q13561 401 aaKnown RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 GALEQ14376 348 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 IL13RA2Q14627 380 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 PNLIPRP3Q17RR3 467 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 TGIF2LXQ8IUE1 241 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 IZUMO1Q8IYV9 350 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 DHRSXQ8N5I4 330 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 COMMD1Q8N668 190 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 TMEM104Q8NE00 496 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 SETD9Q8NE22 299 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 PXT1Q8NFP0 134 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 OR5M8Q8NGP6 311 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 OR8U1Q8NH10 309 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 RHOXF1Q8NHV9 184 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 ABCG5Q9H222 651 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 PLSCR3Q9NRY6 295 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 SCOCQ9UIL1 159 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 ST3GAL6Q9Y274 331 aa10.88□□□□□ -0.67
VARS-226ENST00000483275 EXOGQ9Y2C4 368 aaKnown RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 RPL36Q9Y3U8 105 aaKnown RBP10.88□□□□□ -0.67
VARS-226ENST00000483275 TMEM30CPA0ZSE6 113 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 TMEM212A6NML5 194 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 C15orf65H3BRN8 121 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 GEMIN2O14893 280 aaKnown RBP10.87□□□□□ -0.67
VARS-226ENST00000483275 LY86O95711 162 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 FADS2O95864 444 aaKnown RBP10.87□□□□□ -0.67
VARS-226ENST00000483275 SLC2A2P11168 524 aaPredicted RBP10.87□□□□□ -0.67
VARS-226ENST00000483275 RAB3AP20336 220 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 SERPINA2P20848 420 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 MYF6P23409 242 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 F2RL1P55085 397 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 RBM11P57052 281 aaKnown RBP10.87□□□□□ -0.67
VARS-226ENST00000483275 FOXE3Q13461 319 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 EBI3Q14213 229 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 ZNF260Q3ZCT1 412 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 KLHL22Q53GT1 634 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 XAF1Q6GPH4 301 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 OR10V1Q8NGI7 309 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 RTN4IP1Q8WWV3 396 aaPredicted RBP10.87□□□□□ -0.67
VARS-226ENST00000483275 ARL11Q969Q4 196 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 OR5B12Q96R08 314 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 LIN7CQ9NUP9 197 aaKnown RBP10.87□□□□□ -0.67
VARS-226ENST00000483275 ERVK13-1Q9NX77 482 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 ING4Q9UNL4 249 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 RYR2Q92736 4967 aa10.87□□□□□ -0.67
VARS-226ENST00000483275 MAGEA13PA6NCF6 341 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 RAMP3O60896 148 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 RPSAP08865 295 aaKnown RBP10.86□□□□□ -0.67
VARS-226ENST00000483275 NHLRC4P0CG21 123 aaPredicted RBP10.86□□□□□ -0.67
VARS-226ENST00000483275 GABRB1P18505 474 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 CFHR3Q02985 330 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 RAB40BQ12829 278 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 ATAD3CQ5T2N8 411 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 OGFRL1Q5TC84 451 aaPredicted RBP10.86□□□□□ -0.67
VARS-226ENST00000483275 ZNF529Q6P280 563 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 PRR18Q8N4B5 295 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 OR13C5Q8NGS8 318 aa10.86□□□□□ -0.67
VARS-226ENST00000483275 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms