RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 AKR1E2Q96JD6 320 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 SELENOIQ9C0D9 397 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 MMP28Q9H239 520 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 GHRLQ9UBU3 117 aa11.17□□□□□ -0.62
VARS-225ENST00000482996 TRAV39A0A0B4J263 110 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A10PA6NDY2 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A18PA6NE21 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A16PA6NEW6 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A20PA6NIJ5 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A7PA6NKC0 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A12PA8MX19 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A5PA8MXJ8 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A23PA8MXZ1 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 NPIPB11E5RHQ5 1161 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A15PP0C7V4 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A13PP0C7W8 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A14PP0C7W9 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FAM90A24PP0C7X0 464 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 UBBP0CG47 229 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 HSMCR30P0CW71 290 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 MGMTP16455 207 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 SSTR5P35346 364 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 LTC4SQ16873 150 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 HSD17B12Q53GQ0 312 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
VARS-225ENST00000482996 TPTE2P1Q5T6R2 138 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 LIPKQ5VXJ0 399 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 PRSS48Q7RTY5 328 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 CEACAM19Q7Z692 300 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 LYPD6Q86Y78 171 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 KLHDC1Q8N7A1 406 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 FCGR1BQ92637 280 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 CST11Q9H112 138 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 BANF2Q9H503 90 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 ZNF702PQ9H963 129 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 RAB9BQ9NP90 201 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 ISYNA1Q9NPH2 558 aa11.16□□□□□ -0.62
VARS-225ENST00000482996 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
VARS-225ENST00000482996 J3QR06 171 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 MT-ND4P03905 459 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 VSIG10L2P0DP72 767 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 INSL4Q14641 139 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 TRAM1Q15629 374 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 NEDD8Q15843 81 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 C2orf68Q2NKX9 166 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 FAM27D1Q5T7N8 215 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 RAB12Q6IQ22 244 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 ZNF497Q6ZNH5 498 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 TMEM104Q8NE00 496 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 CCDC107Q8WV48 283 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 TOMM40LQ969M1 308 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 ARL11Q969Q4 196 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 RPEQ96AT9 228 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 MMP27Q9H306 513 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 BATF3Q9NR55 127 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 ETAA1Q9NY74 926 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 PSG11Q9UQ72 335 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 PEX16Q9Y5Y5 336 aa11.15□□□□□ -0.62
VARS-225ENST00000482996 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 AIPO00170 330 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 ORC5O43913 435 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 NOL3O60936 208 aaKnown RBP11.14□□□□□ -0.63
VARS-225ENST00000482996 PEX14O75381 377 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 CA11O75493 328 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 GLAP06280 429 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 SMIM18P0DKX4 95 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 SRMP19623 302 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 FUT3P21217 361 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 PSMA1P25786 263 aaKnown RBP11.14□□□□□ -0.63
VARS-225ENST00000482996 MLLT11Q13015 90 aaPredicted RBP11.14□□□□□ -0.63
VARS-225ENST00000482996 MADCAM1Q13477 382 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 TPBGQ13641 420 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 C6orf183Q5T699 404 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 LRRTM1Q86UE6 522 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 Q8N2B8 174 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 OR52M1Q8NGK5 317 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 OR10X1Q8NGY0 326 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 LEAP2Q969E1 77 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 Q96M66 194 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 LIN7BQ9HAP6 207 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 MEGF8Q7Z7M0 2845 aa11.14□□□□□ -0.63
VARS-225ENST00000482996 SPINT2O43291 252 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 PDCD6O75340 191 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 SC5DO75845 299 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 MPIG6BO95866 241 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 UCHL1P09936 223 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 FAM106CPP0CH98 169 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 CD24P25063 80 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 VDAC2P45880 294 aaPredicted RBP11.13□□□□□ -0.63
VARS-225ENST00000482996 RPL5P46777 297 aaKnown RBP11.13□□□□□ -0.63
VARS-225ENST00000482996 GNG10P50151 68 aa11.13□□□□□ -0.63
VARS-225ENST00000482996 GP2P55259 537 aaKnown RBP11.13□□□□□ -0.63
VARS-225ENST00000482996 HABP2Q14520 560 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms