RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 YLPM1P49750 1951 aaKnown RBP2.54□□□□□ -2
SF3B1-210ENST00000482158 SPATA31E1Q6ZUB1 1445 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 A0A0A6YYH2 397 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 FABP12A6NFH5 140 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 A6NJ64 397 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 MKRN2OSH3BPM6 223 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 KLRC4-KLRK1H3BQV0 150 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 PGRMC1O00264 195 aaKnown RBP2.54□□□□□ -2
SF3B1-210ENST00000482158 SHOX2O60902 331 aaPredicted RBP2.54□□□□□ -2
SF3B1-210ENST00000482158 CST4P01036 141 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 IL6P05231 212 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 CTXN2P0C2S0 81 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 OCMP0CE72 109 aaPredicted RBP2.54□□□□□ -2
SF3B1-210ENST00000482158 SERPINB9P50453 376 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 PSMD7P51665 324 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 UAP1Q16222 522 aaPredicted RBP2.54□□□□□ -2
SF3B1-210ENST00000482158 FAM151BQ6UXP7 276 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 C3orf22Q8N5N4 141 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 CDRT4Q8N9R6 151 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 LINC01587Q99440 93 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 MED10Q9BTT4 135 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 ABCG5Q9H222 651 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 DIABLOQ9NR28 239 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 URGCP-MRPS24S4R325 110 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 PLXNB1O43157 2135 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 LTBP2Q14767 1821 aa2.54□□□□□ -2
SF3B1-210ENST00000482158 A0A0B4J2C4 111 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 PGPA6NDG6 321 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 K7ERS5 55 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 CDIPTO14735 213 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 LIN7AO14910 233 aaPredicted RBP2.53□□□□□ -2
SF3B1-210ENST00000482158 DENRO43583 198 aaKnown RBP2.53□□□□□ -2
SF3B1-210ENST00000482158 IFNA6P05013 189 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 RD3LP0DJH9 198 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 GIMD1P0DJR0 217 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 PSKH1P11801 424 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 PRTN3P24158 256 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 GTF2H1P32780 548 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 ACTR1BP42025 376 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 TNFRSF9Q07011 255 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 BAXQ07812 192 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 CYHR1Q6ZMK1 362 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 BOD1L2Q8IYS8 172 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 TBC1D19Q8N5T2 526 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 EIF4E3Q8N5X7 224 aaKnown RBP2.53□□□□□ -2
SF3B1-210ENST00000482158 OR8G5Q8NG78 346 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 NELFBQ8WX92 580 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 OR5P2Q8WZ92 322 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 OLFM3Q96PB7 478 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 OR51B6Q9H340 312 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 TAS2R7Q9NYW3 318 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 PBRM1Q86U86 1689 aa2.53□□□□□ -2
SF3B1-210ENST00000482158 DCAF1Q9Y4B6 1507 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 MAP3K5Q99683 1374 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 IGLV10-54A0A075B6I4 117 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 TMEM213A2RRL7 107 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 LEUTXA8MZ59 168 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 GGTLC3B5MD39 225 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 D6RAR5 112 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 LRRN3E7EW58 273 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 H0YJX3 145 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 H3BMM0 161 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 H3BP45 60 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 AQP9O43315 295 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 FADS2O95864 444 aaKnown RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 HLA-AP01891 365 aaKnown RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 FABP1P07148 127 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 SLC35E2BP0CK96 405 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 ZNF708P17019 499 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 ZNF7P17097 686 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 TTPAP49638 278 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 GNG10P50151 68 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 CEBPGP53567 150 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 AP3S2P59780 193 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 S100A12P80511 92 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 TSPAN31Q12999 210 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 EXOC3L4Q17RC7 722 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 SMARCD3Q6STE5 483 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 Q6ZQT7 251 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 SLC13A5Q86YT5 568 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 OR4K17Q8NGC6 315 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 OR2Y1Q8NGV0 311 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 CMTM2Q8TAZ6 248 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 UBE2WQ96B02 151 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 ZMYND19Q96E35 227 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 ZNF251Q9BRH9 671 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 ANAPC13Q9BS18 74 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 SLC25A31Q9H0C2 315 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 GABARAPL1Q9H0R8 117 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 MFSD1Q9H3U5 465 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 WDR54Q9H977 334 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 TMBIM4Q9HC24 238 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 C14orf166Q9Y224 244 aaKnown RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 TBL2Q9Y4P3 447 aaKnown RBP2.52□□□□□ -2.01
SF3B1-210ENST00000482158 TAF1LQ8IZX4 1826 aa2.52□□□□□ -2.01
SF3B1-210ENST00000482158 ATRNO75882 1429 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 M0QXV9 152 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 PSIP1O75475 530 aaKnown RBP2.51□□□□□ -2.01
SF3B1-210ENST00000482158 ADAP1O75689 374 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms