RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 EIF4E3Q8N5X7 224 aaKnown RBP8.28□□□□□ -1.08
GARNL3-216ENST00000481242 FLYWCH2Q96CP2 140 aaKnown RBP8.28□□□□□ -1.08
GARNL3-216ENST00000481242 SMIM12Q96EX1 92 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 ELOVL5Q9NYP7 299 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 ACACAQ13085 2346 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 GREB1LQ9C091 1923 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-216ENST00000481242 DUXBA0A1W2PPF3 345 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 ANKRD20A5PA0PJZ0 165 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 H3BP45 60 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 RD3LP0DJH9 198 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 PMP22Q01453 160 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 HAGHQ16775 308 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 FHL5Q5TD97 284 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 SFTPA2Q8IWL1 248 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 TMEM123Q8N131 208 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 OR2C3Q8N628 320 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF383Q8NA42 475 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 ZNRF4Q8WWF5 429 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 RNF122Q9H9V4 155 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 SH2D2AQ9NP31 389 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 SLC7A10Q9NS82 523 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 METTL1Q9UBP6 276 aaKnown RBP8.28□□□□□ -1.08
GARNL3-216ENST00000481242 GAB2Q9UQC2 676 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 LIPGQ9Y5X9 500 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF318Q5VUA4 2279 aa8.28□□□□□ -1.08
GARNL3-216ENST00000481242 UBE2L5PA0A1B0GUS4 154 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 MS4A18H0YCH9 400 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF658BQ4V348 819 aaPredicted RBP8.27□□□□□ -1.08
GARNL3-216ENST00000481242 LRRTM1Q86UE6 522 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 ADIPOR1Q96A54 375 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 CTHRC1Q96CG8 243 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 R3HDM4Q96D70 268 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 PLPPR2Q96GM1 343 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 POM121Q96HA1 1249 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 TMEM74BQ9NUR3 256 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 RNF115Q9Y4L5 304 aa8.27□□□□□ -1.08
GARNL3-216ENST00000481242 SCN3AQ9NY46 2000 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 MC5RP33032 325 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PDCD1Q15116 288 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 TNXAQ16473 311 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 COL5A1-AS1Q5SY13 56 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 NCR3LG1Q68D85 454 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 GCSAMQ8N6F7 178 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 OR2D3Q8NGH3 330 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 RPUSD4Q96CM3 377 aaKnown RBP8.27□□□□□ -1.09
GARNL3-216ENST00000481242 ATP5SQ99766 215 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 OR2J1Q9GZK6 312 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 GHITMQ9H3K2 345 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 C9orf170A2RU37 121 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PRR19A6NJB7 356 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 UPK3AO75631 287 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 CDS2O95674 445 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PTBP3O95758 552 aaKnown RBP8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PMELP40967 661 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 HLXQ14774 488 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-216ENST00000481242 CEACAM21Q3KPI0 293 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 SP6Q3SY56 376 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 STXBP6Q8NFX7 210 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 TMPRSS13Q9BYE2 586 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 Q9N2K0 584 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 OR1A1Q9P1Q5 309 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 SLC25A10Q9UBX3 287 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-216ENST00000481242 WIPI2Q9Y4P8 454 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 HYAL3O43820 417 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PRSS54Q6PEW0 395 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 UBALD1Q8TB05 177 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PARD6AQ9NPB6 346 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 TMEM167BQ9NRX6 74 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 OR2W1Q9Y3N9 320 aa8.27□□□□□ -1.09
GARNL3-216ENST00000481242 RPL36A-HNRNPH2H7BZ11 118 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 IGKV1D-16P01601 117 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SEMG1P04279 462 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PAFAH1B2P68402 229 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 ROM1Q03395 351 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 ZNF260Q3ZCT1 412 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 FNDC7Q5VTL7 733 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 GGNBP1Q5YKI7 109 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 RHOFQ9HBH0 211 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PITPNC1Q9UKF7 332 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 DOCK5Q9H7D0 1870 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 IGHV3-43A0A0B4J1X8 118 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 A0A1B0GV72 72 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SYNGR2O43760 224 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PPYP01298 95 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 IGHV3-43DP0DP04 118 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 HIST1H3AP68431 136 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PSG4Q00888 419 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PAX5Q02548 391 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PPP1R1AQ13522 171 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SAT2Q96F10 170 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-216ENST00000481242 MS4A7Q9GZW8 240 aaPredicted RBP8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SIRT7Q9NRC8 400 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 CISD1Q9NZ45 108 aaKnown RBP8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PARP14Q460N5 1801 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 GEMIN2O14893 280 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms