RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SERTAD4Q9NUC0 356 aa13.65□□□□□ -0.22
HSPG2-209ENST00000480900 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
HSPG2-209ENST00000480900 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 J3QR06 171 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 SC5DO75845 299 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 MGMTP16455 207 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 CRHBPP24387 322 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 GP2P55259 537 aaKnown RBP13.64□□□□□ -0.23
HSPG2-209ENST00000480900 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
HSPG2-209ENST00000480900 C2orf68Q2NKX9 166 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 FAM27D1Q5T7N8 215 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 ZNF497Q6ZNH5 498 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 CFHR4Q92496 578 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 UFD1Q92890 307 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 AKR1E2Q96JD6 320 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 Q96M66 194 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 SELENOIQ9C0D9 397 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 BANF2Q9H503 90 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 LIN7BQ9HAP6 207 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 PSG11Q9UQ72 335 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 NOTCH3Q9UM47 2321 aa13.64□□□□□ -0.23
HSPG2-209ENST00000480900 MCRIP1C9JLW8 97 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 AIPO00170 330 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 ORC5O43913 435 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 CRTAPO75718 401 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-209ENST00000480900 MT-ND4P03905 459 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 UBBP0CG47 229 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 MNDAP41218 407 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 TPBGQ13641 420 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 LTC4SQ16873 150 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 RBM48Q5RL73 367 aaKnown RBP13.63□□□□□ -0.23
HSPG2-209ENST00000480900 LIPKQ5VXJ0 399 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 GLT8D1Q68CQ7 371 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 RAB12Q6IQ22 244 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 PRSS48Q7RTY5 328 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 LRRTM1Q86UE6 522 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 TMEM104Q8NE00 496 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 OR52M1Q8NGK5 317 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 TOMM40LQ969M1 308 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 RPEQ96AT9 228 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 CST11Q9H112 138 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 ISYNA1Q9NPH2 558 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 PLXNB1O43157 2135 aa13.63□□□□□ -0.23
HSPG2-209ENST00000480900 C15orf65H3BRN8 121 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 CA11O75493 328 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 GLAP06280 429 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 UCHL1P09936 223 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 VSIG10L2P0DP72 767 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 FUT3P21217 361 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 MADCAM1Q13477 382 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 HABP2Q14520 560 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-209ENST00000480900 HSD17B12Q53GQ0 312 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 C1orf100Q5SVJ3 147 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 CEACAM19Q7Z692 300 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 GAPTQ8N292 157 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 ARL11Q969Q4 196 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 ETAA1Q9NY74 926 aa13.62□□□□□ -0.23
HSPG2-209ENST00000480900 OR2F2O95006 317 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 TSPAN15O95858 294 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 IGHV3-7P01780 117 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 CD37P11049 281 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 SRMP19623 302 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 CD24P25063 80 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 GNG10P50151 68 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 BLCAPP62952 87 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 MLLT11Q13015 90 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-209ENST00000480900 TRAM1Q15629 374 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 SIGIRRQ6IA17 410 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 CCDC107Q8WV48 283 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 CAPSLQ8WWF8 208 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 FAM46BQ96A09 425 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 RBM14Q96PK6 669 aaKnown RBP13.61□□□□□ -0.23
HSPG2-209ENST00000480900 SLC25A33Q9BSK2 321 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 RAB9BQ9NP90 201 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 BLOC1S6Q9UL45 172 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 PEX16Q9Y5Y5 336 aa13.61□□□□□ -0.23
HSPG2-209ENST00000480900 A0A1W2PPI3 338 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 PDCD6O75340 191 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 CSF1P09603 554 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 CPEP16870 476 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 PSMA1P25786 263 aaKnown RBP13.6□□□□□ -0.23
HSPG2-209ENST00000480900 RAB7AP51149 207 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 LOXL3P58215 753 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 TMEM30BQ3MIR4 351 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 Q3ZCU0 254 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 ARSJQ5FYB0 599 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-209ENST00000480900 C6orf183Q5T699 404 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 Q6ZS46 218 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 THNSL2Q86YJ6 484 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 OR8H3Q8N146 312 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 C8orf31Q8N9H6 132 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 OR10X1Q8NGY0 326 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 WIPF2Q8TF74 440 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-209ENST00000480900 TMEM203Q969S6 136 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 CNBD2Q96M20 576 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 WNT10AQ9GZT5 417 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 CCDC90BQ9GZT6 254 aa13.6□□□□□ -0.23
HSPG2-209ENST00000480900 GFOD1Q9NXC2 390 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms