RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ODAMA1E959 279 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ORC5O43913 435 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 RBBP9O75884 186 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 LPLP06858 475 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 FCGR3AP08637 254 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 P2RX3P56373 397 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ZNF273Q14593 569 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ZNF846Q147U1 533 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 C4orf46Q504U0 113 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 TMEM200BQ69YZ2 307 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 FAM53AQ6NSI3 398 aaPredicted RBP5.31□□□□□ -1.56
HERC4-210ENST00000480158 FAAP20Q6NZ36 180 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 REG4Q9BYZ8 158 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 DNTTIP1Q9H147 329 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 MMP26Q9NRE1 261 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ZNF469Q96JG9 3925 aaPredicted RBP5.31□□□□□ -1.56
HERC4-210ENST00000480158 LOC105371242A0A075B767 164 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 C22orf46C9J442 243 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 H3BUI4 141 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 GABARAPH6UMI1 98 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 SDCBPO00560 298 aaPredicted RBP5.31□□□□□ -1.56
HERC4-210ENST00000480158 NAPSAO96009 420 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 PMP2P02689 132 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 MELTFP08582 738 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 SCTP09683 121 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 GSTT2P0CG29 244 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 GSTT2BP0CG30 244 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 GDNFP39905 211 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 RFX2P48378 723 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 INPP1P49441 399 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 PPP5CP53041 499 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ARL6IP1Q15041 203 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 PNLIPRP3Q17RR3 467 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ZNF57Q68EA5 555 aaPredicted RBP5.31□□□□□ -1.56
HERC4-210ENST00000480158 SLC35E4Q6ICL7 350 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 BAIAP2L2Q6UXY1 529 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 PDZD9Q8IXQ8 264 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ZNF565Q8N9K5 539 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 BEST4Q8NFU0 473 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 GPX8Q8TED1 209 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 SMIM4Q8WVI0 70 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 NUDT16L1Q9BRJ7 211 aaKnown RBP5.31□□□□□ -1.56
HERC4-210ENST00000480158 WDR12Q9GZL7 423 aaKnown RBP5.31□□□□□ -1.56
HERC4-210ENST00000480158 FAM234AQ9H0X4 552 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 TAF9BQ9HBM6 251 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ONECUT1Q9UBC0 465 aa5.31□□□□□ -1.56
HERC4-210ENST00000480158 ITPR3Q14573 2671 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 TRGV10A0A0A0MS01 117 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 IGHV3-43A0A0B4J1X8 118 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 PPIAL4CA0A0B4J2A2 164 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 CYSRT1A8MQ03 144 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 C12orf77C9JDV5 145 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 M0QYG6 137 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 BET1O15155 118 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 FSTL3O95633 263 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 PPIAL4GP0DN37 164 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 IGHV3-43DP0DP04 118 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 IL7P13232 177 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 SLC25A16P16260 332 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 NFYBP25208 207 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 ARF6P62330 175 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 IGSF11Q5DX21 431 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 TRIQKQ629K1 86 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 C16orf87Q6PH81 154 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 TCF23Q7RTU1 214 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 LYSMD2Q8IV50 215 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 OR4D10Q8NGI6 311 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 OR1L1Q8NH94 360 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 SNAPC3Q92966 411 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 LEAP2Q969E1 77 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 ARL11Q969Q4 196 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 RAB39BQ96DA2 213 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 KIRREL1Q96J84 757 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 TMPRSS13Q9BYE2 586 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 Q9N2K0 584 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.3□□□□□ -1.56
HERC4-210ENST00000480158 RPUSD1Q9UJJ7 312 aaKnown RBP5.3□□□□□ -1.56
HERC4-210ENST00000480158 ARHGAP32A7KAX9 2087 aa5.3□□□□□ -1.56
HERC4-210ENST00000480158 hADV38S2A0JD32 116 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 F5H0A9 414 aaPredicted RBP5.29□□□□□ -1.56
HERC4-210ENST00000480158 H7C1Q1 480 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 MMP23AO75900 390 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 CD3DP04234 171 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 GLAP06280 429 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 HEXAP06865 529 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 CD40LGP29965 261 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 HRH1P35367 487 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 KCNJ3P48549 501 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 ARPC4P59998 168 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 IFITM3Q01628 133 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 CHRFAM7AQ494W8 412 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 UTF1Q5T230 341 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 PRAMEF5Q5TYX0 476 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 SHEQ5VZ18 495 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 ZNF782Q6ZMW2 699 aaPredicted RBP5.29□□□□□ -1.56
HERC4-210ENST00000480158 LINC00299Q6ZSB3 139 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 TOMM5Q8N4H5 51 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 GDPD1Q8N9F7 314 aa5.29□□□□□ -1.56
HERC4-210ENST00000480158 OR10V1Q8NGI7 309 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms