RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 GABRR1P24046 479 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 OR10A3P58181 314 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 RPS27AP62979 156 aaKnown RBP12.62□□□□□ -0.39
HDLBP-238ENST00000479894 SCN1BQ07699 218 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 GDPD3Q7L5L3 318 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 RNF144BQ7Z419 303 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 TMEM185AQ8NFB2 350 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 OR51D1Q8NGF3 324 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 OR56B1Q8NGI3 324 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 OR10K1Q8NGX5 313 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 ISOC1Q96CN7 298 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 DGCR14Q96DF8 476 aaKnown RBP12.62□□□□□ -0.39
HDLBP-238ENST00000479894 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 RNF167Q9H6Y7 350 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 RAB18Q9NP72 206 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 RSL24D1Q9UHA3 163 aaKnown RBP12.62□□□□□ -0.39
HDLBP-238ENST00000479894 WI2-2373I1.2A0A1W2PRP0 233 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 MCRIP1C9JLW8 97 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 OR2H2O95918 312 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 TK1P04183 234 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 VSIG10L2P0DP72 767 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 ZNF182P17025 639 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-238ENST00000479894 NDUFB7P17568 137 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 DCTN2Q13561 401 aaKnown RBP12.61□□□□□ -0.39
HDLBP-238ENST00000479894 PAN3Q58A45 887 aaKnown RBP12.61□□□□□ -0.39
HDLBP-238ENST00000479894 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 OR8H2Q8N162 312 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 LYG1Q8N1E2 194 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 CD177Q8N6Q3 437 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 ST8SIA4Q92187 359 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 FAM46BQ96A09 425 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 SEH1LQ96EE3 360 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 Q96M66 194 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 CMTM3Q96MX0 182 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 MAB21L2Q9Y586 359 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 CEPT1Q9Y6K0 416 aa12.61□□□□□ -0.39
HDLBP-238ENST00000479894 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 A0A1W2PPE2 198 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 A0A1W2PR64 198 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 A6NJ64 397 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 GEMIN2O14893 280 aaKnown RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 NPFFO15130 113 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 PAHP00439 452 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 CSN2P05814 226 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 DUSP1P28562 367 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 ERP29P30040 261 aaKnown RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 SNU13P55769 128 aaKnown RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 QRFPP83859 136 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 MEF2CQ06413 473 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 GRK1Q15835 563 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 PIGYQ3MUY2 71 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 ATAD3CQ5T2N8 411 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 CMTM4Q8IZR5 234 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 FAM216BQ8N7L0 139 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 ZNRF1Q8ND25 227 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 TMEM104Q8NE00 496 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 KRTAP17-1Q9BYP8 105 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 NAA50Q9GZZ1 169 aaKnown RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 BANF2Q9H503 90 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 RAB9BQ9NP90 201 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
HDLBP-238ENST00000479894 SPATA2Q9UM82 520 aa12.6□□□□□ -0.39
HDLBP-238ENST00000479894 STAB2Q8WWQ8 2551 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 ADARB2-AS1A8MUL3 147 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 H3BMQ9 156 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 SIRPB1O00241 398 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 PDCD6O75340 191 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 ZNF737O75373 536 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 CLEC2LP0C7M8 214 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 SLC2A2P11168 524 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-238ENST00000479894 CLDN12P56749 244 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 PAX5Q02548 391 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 Q6P435 159 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 NR2C2APQ86WQ0 139 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 FAM89BQ8N5H3 189 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 BEND2Q8NDZ0 799 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-238ENST00000479894 DPCDQ9BVM2 203 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-238ENST00000479894 RIMS4Q9H426 269 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-238ENST00000479894 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
HDLBP-238ENST00000479894 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
HDLBP-238ENST00000479894 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
HDLBP-238ENST00000479894 hADV38S2A0JD32 116 aa12.58□□□□□ -0.4
HDLBP-238ENST00000479894 H3BUX3 64 aa12.58□□□□□ -0.4
HDLBP-238ENST00000479894 SLC33A1O00400 549 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-238ENST00000479894 LDLRAD4O15165 306 aa12.58□□□□□ -0.4
HDLBP-238ENST00000479894 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
HDLBP-238ENST00000479894 BLVRBP30043 206 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-238ENST00000479894 MRPS15P82914 257 aaKnown RBP12.58□□□□□ -0.4
HDLBP-238ENST00000479894 UNC119Q13432 240 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms