RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CTDSPLO15194 276 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PLPP2O43688 288 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 SCAF4O95104 1147 aaKnown RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 ZFPL1O95159 310 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 IGHV2-5P01817 119 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 APOC3P02656 99 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 GLAP06280 429 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 HKR1P10072 659 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 RPA2P15927 270 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 NFYAP23511 347 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 CD200P41217 278 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 CRYBB2P43320 205 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 MAGEB1P43366 347 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 ART1P52961 327 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 GMFBP60983 142 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 GNG3P63215 75 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 EIF5AP63241 154 aaKnown RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 CCL8P80075 99 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 MRPS11P82912 194 aaKnown RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PRDX4Q13162 271 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 ICAM4Q14773 271 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 HMGN3Q15651 99 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 SSX1Q16384 188 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 HAGHQ16775 308 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 CEACAM21Q3KPI0 293 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 RNASE10Q5GAN6 216 aaKnown RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 DMKNQ6E0U4 476 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PRSS57Q6UWY2 283 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 Q6ZSR3 168 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 MOB3CQ70IA8 216 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 LRRC28Q86X40 367 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 SERPINA12Q8IW75 414 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 C1orf87Q8N0U7 546 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 ZFP41Q8N8Y5 198 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 DNAAF1Q8NEP3 725 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PXT1Q8NFP0 134 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 OR10AD1Q8NGE0 317 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 OR5A2Q8NGI9 324 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 OR5D14Q8NGL3 314 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 ITLN1Q8WWA0 313 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 IGFBPL1Q8WX77 278 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 GHSRQ92847 366 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 FGGYQ96C11 551 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 RRNAD1Q96FB5 475 aaKnown RBP5.21□□□□□ -1.58
SF3B1-209ENST00000479532 BORCS8Q96FH0 119 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 TIMD4Q96H15 378 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 OR2V2Q96R30 315 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PFDN5Q99471 154 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PDCD1LG2Q9BQ51 273 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PIMREGQ9BSJ6 248 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 SEC11CQ9BY50 192 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 SLITRK2Q9H156 845 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 FN3KRPQ9HA64 309 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 NLKQ9UBE8 527 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 GAB2Q9UQC2 676 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 KCNIP3Q9Y2W7 256 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 RHBDD3Q9Y3P4 386 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 PLCE1Q9P212 2302 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 CACNA1DQ01668 2161 aa5.21□□□□□ -1.58
SF3B1-209ENST00000479532 FAM74A7A6NL05 159 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 TRDCB7Z8K6 153 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 MCRIP1C9JLW8 97 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 F5H5P2 479 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 G3V3Q6 166 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 TSTD3H0UI37 97 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 MLNRO43193 412 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 HPGDSO60760 199 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 CYB5AP00167 134 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 CFDP00746 253 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-209ENST00000479532 IGHV4-39P01824 125 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 HLA-DPB1P04440 258 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 IL5P05113 134 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ELANEP08246 267 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 HCKP08631 526 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 SPP1P10451 314 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 MUC1P15941 1255 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-209ENST00000479532 HIST1H1BP16401 226 aaKnown RBP5.2□□□□□ -1.58
SF3B1-209ENST00000479532 MGMTP16455 207 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ANXA7P20073 488 aaKnown RBP5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ANOS1P23352 680 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ACKR3P25106 362 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 GIFP27352 417 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 GABRA5P31644 462 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 PTGFRP43088 359 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 SOX2P48431 317 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 FUT6P51993 359 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ATP1B3P54709 279 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 PKIAP61925 76 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 TPBGQ13641 420 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF345Q14585 488 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 CLEC12BQ2HXU8 276 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 Q499Y3 187 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 FAM74A3Q4VXF1 159 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 TMEM255AQ5JRV8 349 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 Q5PR19 223 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 LIPKQ5VXJ0 399 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 Q6ZR03 302 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF573Q86YE8 665 aa5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ZCCHC24Q8N2G6 241 aaKnown RBP5.2□□□□□ -1.58
SF3B1-209ENST00000479532 ZNF485Q8NCK3 441 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms