RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PPP1CBP62140 327 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 C1orf174Q8IYL3 243 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 FAM3CQ92520 227 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 NAT6Q93015 286 aa18.31■□□□□ 0.52
SDF4-206ENST00000478938 UTS2O95399 124 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 PAX9P55771 341 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 ZNF695Q8IW36 515 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 SIGLEC12Q96PQ1 595 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 OR10A5Q9H207 317 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 H0YIG0 161 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 VAMP3Q15836 100 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 BRICD5Q6PL45 260 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 OR4F5Q8NH21 305 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 LHX4Q969G2 390 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 STARD4Q96DR4 205 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 OR4F4Q96R69 305 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 ZDHHC11Q9H8X9 412 aa18.3■□□□□ 0.52
SDF4-206ENST00000478938 ZNF814B7Z6K7 855 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 WNT2P09544 360 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 ELAVL3Q14576 367 aaKnown RBP18.29■□□□□ 0.52
SDF4-206ENST00000478938 HNRNPA1L2Q32P51 320 aaKnown RBP18.29■□□□□ 0.52
SDF4-206ENST00000478938 MORN2Q502X0 79 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 TMEM144Q7Z5S9 345 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 C20orf196Q8IYI0 205 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 PRR22Q8IZ63 422 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 CRIPAKQ8N1N5 446 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 PSMF1Q92530 271 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 ZFYVE21Q9BQ24 234 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 TM2D1Q9BX74 207 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 UBE2J1Q9Y385 318 aaPredicted RBP18.29■□□□□ 0.52
SDF4-206ENST00000478938 RTTNQ86VV8 2226 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 CCL16O15467 120 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 GDF9O60383 454 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 CEACAM5P06731 702 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 ZNF121P58317 390 aaPredicted RBP18.29■□□□□ 0.52
SDF4-206ENST00000478938 SCGB1C1Q8TD33 95 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 TMEM222Q9H0R3 208 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 MED29Q9NX70 200 aa18.29■□□□□ 0.52
SDF4-206ENST00000478938 C5orf63A6NC05 138 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 CISD3P0C7P0 127 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 TNFSF4P23510 183 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 EFNA3P52797 238 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 TBC1D29Q9UFV1 150 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 A0A1W2PR80 420 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 MPPED1O15442 326 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 MMP23AO75900 390 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 MT-ATP6P00846 226 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 LHFPL4Q7Z7J7 247 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 CCDC71LQ8N9Z2 235 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 GPR146Q96CH1 333 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 SPIN2AQ99865 258 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 SPIN2BQ9BPZ2 258 aa18.28■□□□□ 0.52
SDF4-206ENST00000478938 HOXA2O43364 376 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 IGHMP01871 453 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 FCGR2AP12318 317 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 DNM1P34Q6PK57 102 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 SELENOHQ8IZQ5 122 aaKnown RBP18.27■□□□□ 0.52
SDF4-206ENST00000478938 SLC46A1Q96NT5 459 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 BET1LQ9NYM9 111 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 ATG2BQ96BY7 2078 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 COL4A6Q14031 1691 aa18.27■□□□□ 0.52
SDF4-206ENST00000478938 HCRTR1O43613 425 aa18.27■□□□□ 0.51
SDF4-206ENST00000478938 PSG1P11464 419 aa18.27■□□□□ 0.51
SDF4-206ENST00000478938 LHX2P50458 406 aa18.27■□□□□ 0.51
SDF4-206ENST00000478938 ID3Q02535 119 aa18.27■□□□□ 0.51
SDF4-206ENST00000478938 PIGTQ969N2 578 aa18.27■□□□□ 0.51
SDF4-206ENST00000478938 ZBP1Q9H171 429 aa18.27■□□□□ 0.51
SDF4-206ENST00000478938 GON4LQ3T8J9 2241 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 SZT2Q5T011 3432 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 TRAV30A0A087WSZ9 112 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 MANSC4A6NHS7 340 aaPredicted RBP18.26■□□□□ 0.51
SDF4-206ENST00000478938 PRR19A6NJB7 356 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 SERPINA7P05543 415 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 BMP5P22003 454 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 APOOQ9BUR5 198 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 EDDM13A0A1B0GTR0 161 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 OR6C6A6NF89 314 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 AQP7P3A6NL99 342 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 C1QTNF9BB2RNN3 333 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 NPIPA5E9PKD4 350 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 TMEM250H0YL14 139 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 CRISP2P16562 243 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 CBLN1P23435 193 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 BLKP51451 505 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 BAGE3Q86Y29 109 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 BAGE2Q86Y30 109 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 ASB10Q8WXI3 467 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 DGAT2Q96PD7 388 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 PHPT1Q9NRX4 125 aaPredicted RBP18.26■□□□□ 0.51
SDF4-206ENST00000478938 NPIPA1Q9UND3 350 aa18.26■□□□□ 0.51
SDF4-206ENST00000478938 VSTM2BA6NLU5 285 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 E9PLN8 166 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 TSPOP30536 169 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 MPLP40238 635 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 NPBWR2P48146 333 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 HERV-K104P61576 105 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 ZP4Q12836 540 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 POLR1DQ9Y2S0 133 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 MKI67P46013 3256 aaKnown RBP18.25■□□□□ 0.51
SDF4-206ENST00000478938 HS3ST1O14792 307 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms