RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 RNF144BQ7Z419 303 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 SLC35E3Q7Z769 313 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 C8orf31Q8N9H6 132 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 SETD9Q8NE22 299 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 OR10K1Q8NGX5 313 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 RFESDQ8TAC1 157 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 THRSPQ92748 146 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 ZNF649Q9BS31 505 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 S100A14Q9HCY8 104 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 C8orf4Q9NR00 106 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 NOTCH3Q9UM47 2321 aa11.48□□□□□ -0.57
SMARCE1-209ENST00000478349 PLXNB1O43157 2135 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 SDCBPO00560 298 aaPredicted RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 RRP9O43818 475 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 ORC5O43913 435 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 MPIG6BO95866 241 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 IGKV1D-33P01593 117 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 IGKV1-33P01594 117 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 SERPINA2P20848 420 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 GTF2A1P52655 376 aaPredicted RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 GP2P55259 537 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 TAS2R43P59537 309 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 YIF1BQ5BJH7 314 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 TRAT1Q6PIZ9 186 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 MOB3BQ86TA1 216 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 PLPPR1Q8TBJ4 325 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 MRPS24Q96EL2 167 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 BABAM2Q9NXR7 383 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 DIMT1Q9UNQ2 313 aaKnown RBP11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 DSCAML1Q8TD84 2053 aa11.47□□□□□ -0.57
SMARCE1-209ENST00000478349 SH2D7A6NKC9 451 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 AIPO00170 330 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 AP4M1O00189 453 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 SPINT2O43291 252 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 CDRT1O95170 752 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 IGHV3-7P01780 117 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 RPL23AP62750 156 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 Q499Y3 187 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 C6orf183Q5T699 404 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 TTC23Q5W5X9 447 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 UNQ9370/PRO34162Q6UXP9 181 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 TGIF2LXQ8IUE1 241 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 IZUMO1Q8IYV9 350 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 OR8H1Q8NGG4 311 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 OR2T10Q8NGZ9 312 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 APH1BQ8WW43 257 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 RGP1Q92546 391 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 LEAP2Q969E1 77 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 ARL11Q969Q4 196 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 ZNF184Q99676 751 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 SLC29A1Q99808 456 aa11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 LIN7CQ9NUP9 197 aaKnown RBP11.46□□□□□ -0.57
SMARCE1-209ENST00000478349 IGHV1-3A0A0C4DH29 117 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 MCRIP1C9JLW8 97 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 EBAG9O00559 213 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 GEMIN2O14893 280 aaKnown RBP11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 CA11O75493 328 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 BAG2O95816 211 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 IGHG2P01859 326 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 FSTP19883 344 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 MYCNOSP40205 109 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 HNF4GQ14541 408 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 SLC22A6Q4U2R8 563 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 TEX38Q6PEX7 206 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 OR2W3Q7Z3T1 314 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 LINC00311Q8N616 119 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 LINC00482Q8N8I6 264 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 GNG12Q9UBI6 72 aa11.45□□□□□ -0.58
SMARCE1-209ENST00000478349 FAM90A10PA6NDY2 464 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 FAM90A7PA6NKC0 464 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 FAM90A23PA8MXZ1 464 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 OGG1O15527 345 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 MAPK3P27361 379 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 ETV1P50549 477 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 EBI3Q14213 229 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 OR2G6Q5TZ20 316 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 ZNF497Q6ZNH5 498 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 ZNF329Q86UD4 541 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 CDH26Q8IXH8 852 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 STPG2Q8N412 459 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 JAGN1Q8N5M9 183 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 TMEM80Q96HE8 168 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 RASL11BQ9BPW5 248 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 GFOD1Q9NXC2 390 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 TRAPPC2LQ9UL33 140 aa11.44□□□□□ -0.58
SMARCE1-209ENST00000478349 TRBV5-5A0A0J9YX44 114 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 EFCAB10A6NFE3 127 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 WBP4O75554 376 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 GPX5O75715 221 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 MOSP00540 346 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 OR5H8P0DN80 308 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 CD1BP29016 333 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 THBS3P49746 956 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 EGFEM1PQ0D2K5 195 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 SMN1Q16637 294 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 DEFB121Q5J5C9 76 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms