RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 EIF4E3Q8N5X7 224 aaKnown RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 PP6455Q8WZ26 134 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 DOK5Q9P104 306 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 LOC390937A0A1W2PQ73 354 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 FGF16O43320 207 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CBR3O75828 277 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CTSDP07339 412 aaPredicted RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 LIFP15018 202 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 PLP2Q04941 152 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 PRDX4Q13162 271 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 PNLIPRP3Q17RR3 467 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 ZNF787Q6DD87 383 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 ZDHHC23Q8IYP9 409 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 TMEM252Q8N6L7 170 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 OR2Y1Q8NGV0 311 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CPT1CQ8TCG5 803 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CABLES2Q9BTV7 478 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 COA4Q9NYJ1 87 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 TNCP24821 2201 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 LY6G6EA0A0G2JKS1 128 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CRYM-AS1A6NIL9 109 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 LILRA1O75019 489 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CXCL1P09341 107 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 PGA5P0DJD9 388 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 CD33P20138 364 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 FUT3P21217 361 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 ZNF133P52736 654 aaPredicted RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 DCAF12Q5T6F0 453 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 ATP1A1-AS1Q5TC04 95 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 FAHD2BQ6P2I3 314 aaPredicted RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 FAHD2AQ96GK7 314 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 ZNF552Q9H707 407 aaPredicted RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 PNRC2Q9NPJ4 139 aaKnown RBP8.41□□□□□ -1.06
CMC1-209ENST00000477739 U3KQA8 63 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 MED12LQ86YW9 2145 aa8.41□□□□□ -1.06
CMC1-209ENST00000477739 AP4M1O00189 453 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 DVL1O14640 695 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 PDCD6O75340 191 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 RHBDL1O75783 438 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 UMODP07911 640 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 FGF5P12034 268 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 COX6A1P12074 109 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 RPS23P62266 143 aaKnown RBP8.4□□□□□ -1.06
CMC1-209ENST00000477739 RAB1AP62820 205 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 BAXQ07812 192 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 OR10J5Q8NHC4 309 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 TMEM171Q8WVE6 324 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 LHX4Q969G2 390 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 Q96M66 194 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 STARD10Q9Y365 291 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 TAAR5O14804 337 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 CYTIPO60759 359 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 SLC25A53Q5H9E4 307 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 ZNF826PQ6ZT77 177 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 UBALD2Q8IYN6 164 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 OR4F5Q8NH21 305 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 OR4F4Q96R69 305 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 SSX3Q99909 188 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 WDR54Q9H977 334 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 OBP2BQ9NPH6 170 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 GLRX2Q9NS18 164 aa8.4□□□□□ -1.06
CMC1-209ENST00000477739 GAR1Q9NY12 217 aaKnown RBP8.4□□□□□ -1.06
CMC1-209ENST00000477739 DBX1A6NMT0 343 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 CD55P08174 381 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 COL8A2P25067 703 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 EIF2S3P41091 472 aaKnown RBP8.4□□□□□ -1.07
CMC1-209ENST00000477739 GABRA2P47869 451 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 FABP6P51161 128 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 LSM6P62312 80 aaKnown RBP8.4□□□□□ -1.07
CMC1-209ENST00000477739 RAC1P63000 192 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 TMEM187Q14656 261 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 BTNL8Q6UX41 500 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 SAT2Q96F10 170 aaPredicted RBP8.4□□□□□ -1.07
CMC1-209ENST00000477739 PLEKHA2Q9HB19 425 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 SLC39A9Q9NUM3 307 aa8.4□□□□□ -1.07
CMC1-209ENST00000477739 NXPH2O95156 264 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 RPS2P15880 293 aaKnown RBP8.39□□□□□ -1.07
CMC1-209ENST00000477739 ZNF266Q14584 549 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 RSPO1Q2MKA7 263 aaPredicted RBP8.39□□□□□ -1.07
CMC1-209ENST00000477739 MRPL41Q8IXM3 137 aaKnown RBP8.39□□□□□ -1.07
CMC1-209ENST00000477739 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 PARP11Q9NR21 331 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 ZNF107Q9UII5 783 aaPredicted RBP8.39□□□□□ -1.07
CMC1-209ENST00000477739 TIMM10BQ9Y5J6 103 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 CHD3Q12873 2000 aaKnown RBP8.39□□□□□ -1.07
CMC1-209ENST00000477739 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 ATRXP46100 2492 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 A0A1B0GV90 55 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 YKT6O15498 198 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 MAGEA5P43359 124 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 CYB561P49447 251 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 GAMTQ14353 236 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 SURF2Q15527 256 aaPredicted RBP8.39□□□□□ -1.07
CMC1-209ENST00000477739 FADS6Q8N9I5 356 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 Q8WTZ3 238 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 GATAD1Q8WUU5 269 aa8.39□□□□□ -1.07
CMC1-209ENST00000477739 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms