RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 MT-ND4P03905 459 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 BLCAPP62952 87 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 INSL4Q14641 139 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 ATAD3CQ5T2N8 411 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 CCDC144NLQ6NUI1 221 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 OR52M1Q8NGK5 317 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 RFESDQ8TAC1 157 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 PHYHIPQ92561 330 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 VCX3BQ9H321 246 aa17.42■□□□□ 0.38
COL9A3-211ENST00000477612 AMMECR1Q9Y4X0 333 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-211ENST00000477612 FAM90A9PA6NNJ1 464 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 GLAP06280 429 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 SSTR5P35346 364 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 RBM39Q14498 530 aaKnown RBP17.41■□□□□ 0.38
COL9A3-211ENST00000477612 HABP2Q14520 560 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-211ENST00000477612 C2orf68Q2NKX9 166 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 Q6ZS46 218 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 THNSL2Q86YJ6 484 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 ISYNA1Q9NPH2 558 aa17.41■□□□□ 0.38
COL9A3-211ENST00000477612 TRAV39A0A0B4J263 110 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 MCRIP1C9JLW8 97 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 TSPAN15O95858 294 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 MGMTP16455 207 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 MNDAP41218 407 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 MED22Q15528 200 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 C1orf100Q5SVJ3 147 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 LRRTM1Q86UE6 522 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 TMEM104Q8NE00 496 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 AKR1E2Q96JD6 320 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 Q96M66 194 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 RBM14Q96PK6 669 aaKnown RBP17.4■□□□□ 0.38
COL9A3-211ENST00000477612 OCSTAMPQ9BR26 566 aa17.4■□□□□ 0.38
COL9A3-211ENST00000477612 CA11O75493 328 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 OR2F2O95006 317 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 VSIG10L2P0DP72 767 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 CRHBPP24387 322 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 CD24P25063 80 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 TPBGQ13641 420 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 FAM27D1Q5T7N8 215 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 SIGIRRQ6IA17 410 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 LINC00311Q8N616 119 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 C8orf31Q8N9H6 132 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 LEAP2Q969E1 77 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 TMED9Q9BVK6 235 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 SELENOIQ9C0D9 397 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 BANF2Q9H503 90 aa17.39■□□□□ 0.37
COL9A3-211ENST00000477612 RGS10O43665 173 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 CSF1P09603 554 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 UCHL1P09936 223 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 UBBP0CG47 229 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 SRMP19623 302 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 HSPA13P48723 471 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 RAB7AP51149 207 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 LOXL3P58215 753 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 MADCAM1Q13477 382 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 Q3ZCU0 254 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 FBLN7Q53RD9 439 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 RAB12Q6IQ22 244 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 PRSS48Q7RTY5 328 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 NEK7Q8TDX7 302 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 ARL11Q969Q4 196 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 RPEQ96AT9 228 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 SLC25A33Q9BSK2 321 aa17.38■□□□□ 0.37
COL9A3-211ENST00000477612 A0A1W2PPI3 338 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 AIPO00170 330 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 CRTAPO75718 401 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-211ENST00000477612 IGHV3-7P01780 117 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 FUT3P21217 361 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 LTC4SQ16873 150 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 GLT8D1Q68CQ7 371 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 CEACAM19Q7Z692 300 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 OR8H3Q8N146 312 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 CCDC107Q8WV48 283 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 UFD1Q92890 307 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 TOMM40LQ969M1 308 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 CST11Q9H112 138 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 GFOD1Q9NXC2 390 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 ETAA1Q9NY74 926 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 PEX16Q9Y5Y5 336 aa17.37■□□□□ 0.37
COL9A3-211ENST00000477612 PLXNB1O43157 2135 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 ERICH4A6NGS2 130 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 WIPF1O43516 503 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 AMY1AP04745 511 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 AMY2AP04746 511 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 ZNF816Q0VGE8 651 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-211ENST00000477612 MLLT11Q13015 90 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-211ENST00000477612 TRAM1Q15629 374 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 HSD17B12Q53GQ0 312 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 SYT6Q5T7P8 510 aaPredicted RBP17.36■□□□□ 0.37
COL9A3-211ENST00000477612 LIPKQ5VXJ0 399 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 IZUMO2Q6UXV1 221 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 RAB9BQ9NP90 201 aa17.36■□□□□ 0.37
COL9A3-211ENST00000477612 M0QZK8 103 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 FAM106CPP0CH98 169 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 CPEP16870 476 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 VHLP40337 213 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 VDAC2P45880 294 aaPredicted RBP17.35■□□□□ 0.37
COL9A3-211ENST00000477612 GNG10P50151 68 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 DIAPH2-AS1Q14236 149 aa17.35■□□□□ 0.37
COL9A3-211ENST00000477612 TMEM30BQ3MIR4 351 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms