RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PHF21AQ96BD5 680 aa14.34□□□□□ -0.11
PTPN7-209ENST00000477554 SLC25A38Q96DW6 304 aa14.34□□□□□ -0.11
PTPN7-209ENST00000477554 S100A16Q96FQ6 103 aaKnown RBP14.34□□□□□ -0.11
PTPN7-209ENST00000477554 COQ2Q96H96 371 aa14.34□□□□□ -0.11
PTPN7-209ENST00000477554 TM2D1Q9BX74 207 aa14.34□□□□□ -0.11
PTPN7-209ENST00000477554 C1RLQ9NZP8 487 aa14.34□□□□□ -0.11
PTPN7-209ENST00000477554 ST3GAL6Q9Y274 331 aa14.34□□□□□ -0.11
PTPN7-209ENST00000477554 A0A0A6YYH2 397 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 A6NJ64 397 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A22PA8MWA6 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM25AB3EWG3 89 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM25CB3EWG5 89 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM25GB3EWG6 89 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 H3BUI4 141 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 HAX1O00165 279 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 SLC33A1O00400 549 aaPredicted RBP14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 TALDO1P37837 337 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 EFNB2P52799 333 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 RBM11P57052 281 aaKnown RBP14.33□□□□□ -0.11
PTPN7-209ENST00000477554 AESQ08117 197 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 IL13RA2Q14627 380 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 SPIN3Q5JUX0 258 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 RAB12Q6IQ22 244 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 Q96M66 194 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 LPAR5Q9H1C0 372 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 ATG5Q9H1Y0 275 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 MIXL1Q9H2W2 232 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 DIABLOQ9NR28 239 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 GLS2Q9UI32 602 aa14.33□□□□□ -0.11
PTPN7-209ENST00000477554 FAM172BPA6NC97 362 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 GPR137BO60478 399 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 ZNF728P0DKX0 622 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 ELK1P19419 428 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 GUCA2AQ02747 115 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 PLA2G7Q13093 441 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 ATXN7L3Q14CW9 347 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-209ENST00000477554 NCR3LG1Q68D85 454 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 C3orf56Q8N813 242 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 OR56B1Q8NGI3 324 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 OR5D13Q8NGL4 314 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 SSMEM1Q8WWF3 244 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 ZMAT3Q9HA38 289 aaKnown RBP14.32□□□□□ -0.12
PTPN7-209ENST00000477554 FAM96BQ9Y3D0 163 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 TRAV24A0A0B4J272 114 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 EIF4EP06730 217 aaKnown RBP14.32□□□□□ -0.12
PTPN7-209ENST00000477554 IGHV1-8P0DP01 117 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 ZNF44P15621 663 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 LMO1P25800 156 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 TNFSF8P32971 234 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 KRTAP10-3P60369 221 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 MPV17LQ2QL34 196 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 PLA1AQ53H76 456 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 FAM89BQ8N5H3 189 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 DIRAS2Q96HU8 199 aa14.32□□□□□ -0.12
PTPN7-209ENST00000477554 SEBOXQ9HB31 216 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-209ENST00000477554 NBEAL1Q6ZS30 2694 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 TRAV39A0A0B4J263 110 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 SH2D1BO14796 132 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 GEMIN2O14893 280 aaKnown RBP14.31□□□□□ -0.12
PTPN7-209ENST00000477554 FBP1P09467 338 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 VEGFCP49767 419 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 P2RX3P56373 397 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 PRAMEF5Q5TYX0 476 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 PIFOQ8TCI5 191 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 ZNF714Q96N38 554 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 RABL2AQ9UBK7 228 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-209ENST00000477554 EXTL2Q9UBQ6 330 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 RABL2BQ9UNT1 228 aa14.31□□□□□ -0.12
PTPN7-209ENST00000477554 PKD1L1Q8TDX9 2849 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 ODF3BA8MYP8 253 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 H3BUX3 64 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 MGST3O14880 152 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 XRCC3O43542 346 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 CDK2P24941 298 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 RAB13P51153 203 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 ARL6IP1Q15041 203 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 LY6EQ16553 131 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 SPANXN2Q5MJ10 180 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 HIST2H2BDQ6DRA6 164 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 CNIH2Q6PI25 160 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 BRICD5Q6PL45 260 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 TMEM86BQ8N661 226 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 OR10R2Q8NGX6 335 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 PLPPR1Q8TBJ4 325 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 NICN1Q9BSH3 213 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 IFT22Q9H7X7 185 aa14.3□□□□□ -0.12
PTPN7-209ENST00000477554 SPACA1Q9HBV2 294 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms