RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TRAPPC4Q9Y296 219 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 NTNG1Q9Y2I2 539 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PCYT1BQ9Y5K3 369 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 ATP10BO94823 1461 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PZPP20742 1482 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 RPRD2Q5VT52 1461 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 ADAMTSL3P82987 1691 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 CUL7Q14999 1698 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 PPRC1Q5VV67 1664 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 ZNF106Q9H2Y7 1883 aaKnown RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 BLMP54132 1417 aaPredicted RBP1.98□□□□□ -2.09
XRN1-211ENST00000477237 PIK3C2BO00750 1634 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 OTOFQ9HC10 1997 aa1.98□□□□□ -2.09
XRN1-211ENST00000477237 CDC42BPBQ9Y5S2 1711 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 EFCAB6Q5THR3 1501 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 WIZO95785 1651 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 QRICH2Q9H0J4 1663 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 HCFC1P51610 2035 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 SCN4AP35499 1836 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 KIF13AQ9H1H9 1805 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 TRAV36DV7A0A075B6V5 113 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 A0A087WXM4 84 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 ZNF816-ZNF321PA0A0X1KG74 233 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 LOC100130705A0A1B0GUX0 176 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 SPAARA0A1B0GVQ0 90 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 A0A1B0GW55 424 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 ATP6AP2A0A1C7CYW4 349 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 TMEM189A5PLL7 270 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 MAP1LC3B2A6NCE7 125 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 LRIT2A6NDA9 550 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 OR4C46A6NHA9 309 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 D6RAR5 112 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 F5H5K5 113 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CRXO43186 299 aaPredicted RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 XRCC3O43542 346 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 EFNA2O43921 213 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 KBTBD11O94819 623 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 C1orf105O95561 183 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CLIC3O95833 236 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 NRASP01111 189 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 PMP2P02689 132 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CD2P06729 351 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 NMBP08949 121 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 UCHL1P09936 223 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 OR5AC1P0C628 307 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DUX4L2P0CJ85 424 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DUX4L3P0CJ86 424 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DUX4L5P0CJ88 424 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DUX4L6P0CJ89 424 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DUX4L7P0CJ90 424 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CT45A8P0DMV1 189 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CT45A9P0DMV2 189 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 MGMTP16455 207 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 IGFBP3P17936 291 aaPredicted RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 GGT1P19440 569 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 PGCP20142 388 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CSRP1P21291 193 aaKnown RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 RPS3P23396 243 aaKnown RBP eCLIP1.97□□□□□ -2.09
XRN1-211ENST00000477237 FASP25445 335 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 GJB2P29033 226 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 PYCR1P32322 319 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DRD3P35462 400 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 OPRD1P41143 372 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DEFA1P59665 94 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DEFA3P59666 94 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 RAB8AP61006 207 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 RPS28P62857 69 aaKnown RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 HOXC5Q00444 222 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 FKBP3Q00688 224 aaKnown RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 ST3GAL4Q11206 333 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 LY6DQ14210 128 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 PEA15Q15121 130 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 RHEBQ15382 184 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 GUSBP1Q15486 140 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 SPHARQ15513 63 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 NRF1Q16656 503 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 HLA-DRB5Q30154 266 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 ZNF404Q494X3 552 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 CT45A2Q5DJT8 189 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 NXNL2Q5VZ03 156 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 TEX36Q5VZQ5 186 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 TMEM215Q68D42 235 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 DUX4L9Q6RFH8 374 aaPredicted RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 TBPL2Q6SJ96 375 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 Q6ZSR6 202 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 ZNF534Q76KX8 674 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 TSEN54Q7Z6J9 526 aaKnown RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 ANKRD37Q7Z713 158 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 MOB3BQ86TA1 216 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 SLC47A2Q86VL8 602 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 ZNF547Q8IVP9 402 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 C1orf158Q8N1D5 194 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 SVBPQ8N300 66 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 OR2L13Q8N349 312 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 PNKDQ8N490 385 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 SPICQ8N5J4 248 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 MS4A15Q8N5U1 240 aa1.97□□□□□ -2.09
XRN1-211ENST00000477237 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 RELL2Q8NC24 303 aaPredicted RBP1.97□□□□□ -2.09
XRN1-211ENST00000477237 TSTD1Q8NFU3 115 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms