RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 KIR2DS1Q14954 304 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 FAM53AQ6NSI3 398 aaPredicted RBP12.05□□□□□ -0.48
COL4A6-206ENST00000477085 FGFRL1Q8N441 504 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 KIRREL1Q96J84 757 aa12.05□□□□□ -0.48
COL4A6-206ENST00000477085 ABCA4P78363 2273 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 MEIKINA0A087WXM9 373 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 H7C1Q1 480 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 SSNA1O43805 119 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 CREBL2O60519 120 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-206ENST00000477085 TK1P04183 234 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 MUC1P15941 1255 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-206ENST00000477085 AKR1C4P17516 323 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 KCNJ3P48549 501 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 PPOXP50336 477 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
COL4A6-206ENST00000477085 DHODHQ02127 395 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 HMGN3Q15651 99 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 PRR18Q8N4B5 295 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 TMEM185AQ8NFB2 350 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 OR4A4PQ8NGN8 299 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 ZNF431Q8TF32 576 aaPredicted RBP12.04□□□□□ -0.48
COL4A6-206ENST00000477085 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 CABLES2Q9BTV7 478 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 TAF9BQ9HBM6 251 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 CBLN4Q9NTU7 201 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 OR1A1Q9P1Q5 309 aa12.04□□□□□ -0.48
COL4A6-206ENST00000477085 UTP20O75691 2785 aaKnown RBP12.04□□□□□ -0.48
COL4A6-206ENST00000477085 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 IGHV1-69-2A0A0G2JMI3 117 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 C9orf170A2RU37 121 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 LRRC30A6NM36 301 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 A6NNC1 897 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 C12orf77C9JDV5 145 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 TUSC2O75896 110 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 RPS2P15880 293 aaKnown RBP12.03□□□□□ -0.48
COL4A6-206ENST00000477085 FXYD4P59646 89 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 EDDM3AQ14507 147 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 MEX3BQ6ZN04 569 aaKnown RBP12.03□□□□□ -0.48
COL4A6-206ENST00000477085 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 WDR89Q96FK6 387 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-206ENST00000477085 DMRTB1Q96MA1 342 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 GPN1Q9HCN4 374 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-206ENST00000477085 DSCAMO60469 2012 aa12.03□□□□□ -0.48
COL4A6-206ENST00000477085 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 LGALS8O00214 317 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 LY6HO94772 140 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 PPYP01298 95 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 IGKV1-13P0DP09 117 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 SURF2Q15527 256 aaPredicted RBP12.02□□□□□ -0.48
COL4A6-206ENST00000477085 MOB1BQ7L9L4 216 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 DTX2Q86UW9 622 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 ZNF561Q8N587 486 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 OR1L1Q8NH94 360 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 MRGPRDQ8TDS7 321 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 IL1F10Q8WWZ1 152 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 TOMM40LQ969M1 308 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 PCDHB10Q9UN67 800 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 DOPEY1Q5JWR5 2465 aa12.02□□□□□ -0.48
COL4A6-206ENST00000477085 PPIAL4EA0A075B759 164 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 PPIAL4DF5H284 164 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 MGST3O14880 152 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 HLA-AP01891 365 aaKnown RBP12.02□□□□□ -0.49
COL4A6-206ENST00000477085 HEXAP06865 529 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 PPIAL4FP0DN26 164 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 PGAM2P15259 253 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 FAHD2BQ6P2I3 314 aaPredicted RBP12.02□□□□□ -0.49
COL4A6-206ENST00000477085 LYPD2Q6UXB3 125 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 LYG2Q86SG7 212 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 H1FOOQ8IZA3 346 aaPredicted RBP12.02□□□□□ -0.49
COL4A6-206ENST00000477085 FAHD2AQ96GK7 314 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
COL4A6-206ENST00000477085 PARP12Q9H0J9 701 aaKnown RBP12.02□□□□□ -0.49
COL4A6-206ENST00000477085 PRR13Q9NZ81 148 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.49
COL4A6-206ENST00000477085 RAI1Q7Z5J4 1906 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-206ENST00000477085 MYO18BQ8IUG5 2567 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 ODAMA1E959 279 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 C15orf65H3BRN8 121 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 SIGLEC5O15389 551 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 CTSDP07339 412 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-206ENST00000477085 ZNF728P0DKX0 622 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 GNRHRP30968 328 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 SSTR5P35346 364 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 GLP1RP43220 463 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 UCP3P55916 312 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 CR1LQ2VPA4 569 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 TMEM128Q5BJH2 165 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 ZBTB8BQ8NAP8 495 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-206ENST00000477085 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 RSRP1Q9BUV0 290 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 ZNF665Q9H7R5 613 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 LAMP3Q9UQV4 416 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 CHD6Q8TD26 2715 aa12.01□□□□□ -0.49
COL4A6-206ENST00000477085 TRAV38-1A0A0B4J264 116 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms