RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 EML6Q6ZMW3 1958 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 NPIPB9F8W1W9 429 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 JTBO76095 146 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 DXOO77932 396 aaKnown RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 OR2A4O95047 310 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 MGST1P10620 155 aaKnown RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CTRB1P17538 263 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 FPR2P25090 351 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 THBS3P49746 956 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 GNG10P50151 68 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 FAM3BP58499 235 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-204ENST00000476379 GGTLC2Q14390 218 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PLPPR5Q32ZL2 321 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 CTRB2Q6GPI1 263 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ZDHHC23Q8IYP9 409 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 LINC00518Q8N0U6 118 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 LRRC75AQ8NAA5 344 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ABHD14BQ96IU4 210 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 OR2A7Q96R45 310 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 ATG101Q9BSB4 218 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 DCTN5Q9BTE1 182 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 RNF126Q9BV68 326 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 DOK5Q9P104 306 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 PCOLCE2Q9UKZ9 415 aa4.32□□□□□ -1.72
CCDC39-204ENST00000476379 GCN1Q92616 2671 aaKnown RBP4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
CCDC39-204ENST00000476379 IGHV3OR15-7A0A075B7D8 119 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 LY6G6EA0A0G2JKS1 128 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 C3orf85A0A1B0GTC6 90 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ST8SIA5O15466 376 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 TIMM8AO60220 97 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-204ENST00000476379 IGKV3-11P04433 115 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 HEXAP06865 529 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 RNF224P0DH78 156 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 RAC2P15153 192 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF708P17019 499 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 GALP22466 123 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 RAG2P55895 527 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 S100A12P80511 92 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 DEFB109BQ30KR1 87 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 FAM201AQ5SY85 155 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 WDR5BQ86VZ2 330 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF383Q8NA42 475 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF519Q8TB69 540 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ST8SIA1Q92185 356 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 IL22RA2Q969J5 263 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 MRGPRX4Q96LA9 322 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ADAM19Q9H013 955 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 OR1A1Q9P1Q5 309 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CLN8Q9UBY8 286 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 U3KQA8 63 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CELSR2Q9HCU4 2923 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 A0A1W2PPV4 95 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF587BE7ETH6 402 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 TRAF3IP2O43734 574 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-204ENST00000476379 RHBDL1O75783 438 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 MT-CO3P00414 261 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 PPYP01298 95 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 HKR1P10072 659 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 SLC25A4P12235 298 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 G6PCP35575 357 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CEACAM6P40199 344 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 MMP16P51512 607 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 GRB2P62993 217 aaKnown RBP4.31□□□□□ -1.72
CCDC39-204ENST00000476379 DLK1P80370 383 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 PSG4Q00888 419 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 MALRD1Q5VYJ5 2156 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 COMMD1Q8N668 190 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ADGRG7Q96K78 797 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 HEYLQ9NQ87 328 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-204ENST00000476379 MMP26Q9NRE1 261 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 GPR132Q9UNW8 380 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 WIPF3A6NGB9 483 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF735P0CB33 412 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 NR2C1P13056 603 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 OR3A1P47881 315 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 AESQ08117 197 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CLN3Q13286 438 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ACER2Q5QJU3 275 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 PRAMEF6Q5VXH4 476 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 DMRTA1Q5VZB9 504 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CDPF1Q6NVV7 123 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 SKA3Q8IX90 412 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 ASB13Q8WXK3 278 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 APH1AQ96BI3 265 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 SAMD10Q9BYL1 202 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 SLC26A1Q9H2B4 701 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 PSENENQ9NZ42 101 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 STARD10Q9Y365 291 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 EML5Q05BV3 1969 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 C1QTNF9BB2RNN3 333 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 E5RGE8 158 aa4.31□□□□□ -1.72
CCDC39-204ENST00000476379 H3BQ15 152 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms