RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SIGIRRQ6IA17 410 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 TMEM91Q6ZNR0 172 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 OR2T6Q8NHC8 308 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 UBALD1Q8TB05 177 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 NEK7Q8TDX7 302 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 FAM46BQ96A09 425 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 MMP28Q9H239 520 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 SPACA1Q9HBV2 294 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 ISYNA1Q9NPH2 558 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 PSG11Q9UQ72 335 aa16.98■□□□□ 0.31
LIME1-204ENST00000476183 J3QR06 171 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 SRMP19623 302 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 MLLT11Q13015 90 aaPredicted RBP16.97■□□□□ 0.31
LIME1-204ENST00000476183 HSD17B12Q53GQ0 312 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 RAB12Q6IQ22 244 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 Q6ZS46 218 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 Q8N2B8 174 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 RAB26Q9ULW5 256 aa16.97■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A10PA6NDY2 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A18PA6NE21 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A16PA6NEW6 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A20PA6NIJ5 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A7PA6NKC0 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A12PA8MX19 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A5PA8MXJ8 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A23PA8MXZ1 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 MCRIP1C9JLW8 97 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A15PP0C7V4 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A13PP0C7W8 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A14PP0C7W9 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM90A24PP0C7X0 464 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 CD37P11049 281 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 CPEP16870 476 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 GZMHP20718 246 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 CEACAM3P40198 252 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 GNG10P50151 68 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 BLCAPP62952 87 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 C1orf100Q5SVJ3 147 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 GLT8D1Q68CQ7 371 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 HIST2H2BDQ6DRA6 164 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 OR10K2Q6IF99 312 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 FAM53AQ6NSI3 398 aaPredicted RBP16.96■□□□□ 0.31
LIME1-204ENST00000476183 KLHDC1Q8N7A1 406 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 OR10A7Q8NGE5 316 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 CREB3L1Q96BA8 519 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 KCNK15Q9H427 330 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 SERTAD4Q9NUC0 356 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 ETAA1Q9NY74 926 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 GHRLQ9UBU3 117 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 PEX16Q9Y5Y5 336 aa16.96■□□□□ 0.31
LIME1-204ENST00000476183 A0A1W2PPE3 182 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 AIPO00170 330 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 TIMM23O14925 209 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 VSIG8P0DPA2 414 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 DIAPH2-AS1Q14236 149 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 GAPTQ8N292 157 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 ARL11Q969Q4 196 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 GFI1Q99684 422 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 MGLLQ99685 303 aa16.95■□□□□ 0.3
LIME1-204ENST00000476183 M0QZ24 198 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 MPIG6BO95866 241 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 FUT3P21217 361 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 BRS3P32247 399 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 C11orf88Q6PI97 169 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 SLC16A12Q6ZSM3 486 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 OR4K15Q8NH41 348 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 CST11Q9H112 138 aa16.94■□□□□ 0.3
LIME1-204ENST00000476183 TET2Q6N021 2002 aaPredicted RBP16.93■□□□□ 0.3
LIME1-204ENST00000476183 UBE2QL1A1L167 161 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 OOSP1A8MZH6 123 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 C12orf77C9JDV5 145 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 SLC22A1O15245 554 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 ORC5O43913 435 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 PDCD6O75340 191 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 UBBP0CG47 229 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 VSIG10L2P0DP72 767 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 LOXL3P58215 753 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 FABP5Q01469 135 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 UNC119Q13432 240 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 HERPUD1Q15011 391 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 TBCEQ15813 527 aaPredicted RBP16.93■□□□□ 0.3
LIME1-204ENST00000476183 SYT6Q5T7P8 510 aaPredicted RBP16.93■□□□□ 0.3
LIME1-204ENST00000476183 C11orf44Q8N8P7 122 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 RPEQ96AT9 228 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 PRSS22Q9GZN4 317 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 AMMECR1Q9Y4X0 333 aaPredicted RBP16.93■□□□□ 0.3
LIME1-204ENST00000476183 NOTCH1P46531 2555 aa16.93■□□□□ 0.3
LIME1-204ENST00000476183 IGHV3-43A0A0B4J1X8 118 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 GLAP06280 429 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 IGHV3-43DP0DP04 118 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 HTR2CP28335 458 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 ARHGDIBP52566 201 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 QRFPP83859 136 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 TRAM1Q15629 374 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 TMEM95Q3KNT9 176 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 CCDC144NLQ6NUI1 221 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 OR52M1Q8NGK5 317 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 CFHR4Q92496 578 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 TOMM40LQ969M1 308 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 ACOT13Q9NPJ3 140 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms