RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 OR4M2Q8NGB6 313 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 SMIM4Q8WVI0 70 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 NUDCD2Q8WVJ2 157 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 TMEM186Q96B77 213 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
MCF2L-224ENST00000475524 C18orf12Q96KH6 178 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
MCF2L-224ENST00000475524 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
MCF2L-224ENST00000475524 NOTCH2Q04721 2471 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 KBTBD11-OT1A0A1B0GTJ5 212 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 NPIPB11E5RHQ5 1161 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 NAT1P18440 290 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 DLX6P56179 175 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 ACTBP60709 375 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 ACTG1P63261 375 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 PAX8Q06710 450 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 ZNF273Q14593 569 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 TRAPPC6BQ86SZ2 158 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 GDPD1Q8N9F7 314 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 OR52M1Q8NGK5 317 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 FCAMRQ8WWV6 532 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 HDHD3Q9BSH5 251 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-224ENST00000475524 ZNF286AQ9HBT8 521 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 AKIP1Q9NQ31 210 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 CALYQ9NYX4 217 aa12.48□□□□□ -0.41
MCF2L-224ENST00000475524 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 F2RL2O00254 374 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 SPINT2O43291 252 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 RCVRNP35243 200 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 ZNF79Q15937 498 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 Q3ZCU0 254 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 DCAF12L2Q5VW00 463 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 Q6ZPA2 131 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 HOGA1Q86XE5 327 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 CIARTQ8N365 385 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-224ENST00000475524 MFSD4AQ8N468 514 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 OR4A4PQ8NGN8 299 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 MRGPRDQ8TDS7 321 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 TMUB1Q9BVT8 246 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 WDR12Q9GZL7 423 aaKnown RBP12.47□□□□□ -0.41
MCF2L-224ENST00000475524 IFT46Q9NQC8 304 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 MTFP1Q9UDX5 166 aa12.47□□□□□ -0.41
MCF2L-224ENST00000475524 ELF5Q9UKW6 265 aaPredicted RBP12.47□□□□□ -0.41
MCF2L-224ENST00000475524 TRDCB7Z8K6 153 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 C12orf77C9JDV5 145 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 CD5LO43866 347 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 RBBP9O75884 186 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 CTXN2P0C2S0 81 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 RCC1P18754 421 aaPredicted RBP12.46□□□□□ -0.41
MCF2L-224ENST00000475524 TBPP20226 339 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 ERVFRD-1P60508 538 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 HTD2P86397 168 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 C17orf58Q2M2W7 97 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 METTL11BQ5VVY1 283 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 STEAP3Q658P3 488 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 OR52W1Q6IF63 320 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 TEX29Q8N6K0 151 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 DTX3Q8N9I9 347 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 CCDC107Q8WV48 283 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 CYYR1Q96J86 154 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 SRRQ9GZT4 340 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 SIRPDQ9H106 197 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 METTL8Q9H825 291 aaKnown RBP12.46□□□□□ -0.41
MCF2L-224ENST00000475524 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 MMP26Q9NRE1 261 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 HIF1ANQ9NWT6 349 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 ING3Q9NXR8 418 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 TAS2R8Q9NYW2 309 aa12.46□□□□□ -0.41
MCF2L-224ENST00000475524 RBMX2Q9Y388 322 aaKnown RBP12.46□□□□□ -0.41
MCF2L-224ENST00000475524 A0A087X0M5 115 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 A0A1B0GX30 115 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 TGFAP01135 160 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 INHBBP09529 407 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 PTHLHP12272 177 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 CCL3L1P16619 93 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 PRTN3P24158 256 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 FPR2P25090 351 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 CD40LGP29965 261 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 LSAMPQ13449 338 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 ACTBL2Q562R1 376 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 KIAA2026Q5HYC2 2103 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 OR52I2Q8NH67 350 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 GALMQ96C23 342 aa12.45□□□□□ -0.42
MCF2L-224ENST00000475524 CABLES2Q9BTV7 478 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms