RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ACOT2P49753 483 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 AP2S1P53680 142 aaPredicted RBP2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 MEF2CQ06413 473 aaPredicted RBP2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 FMODQ06828 376 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 FUT5Q11128 374 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 AKIRIN2Q53H80 203 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 CST9Q5W186 159 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 GUSBP11Q6P575 273 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 SPNS3Q6ZMD2 512 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 ZNF645Q8N7E2 425 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 CCDC112Q8NEF3 446 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 ORAOV1Q8WV07 137 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 TESCQ96BS2 214 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 TLCD1Q96CP7 247 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 CCDC42Q96M95 316 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 EBPLQ9BY08 206 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 MRPS26Q9BYN8 205 aaKnown RBP2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 CHST5Q9GZS9 411 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 FAM206AQ9NX38 181 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 TAS2R5Q9NYW4 299 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 SNX10Q9Y5X0 201 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 ZFYVE9O95405 1425 aa2.85□□□□□ -1.95
TM9SF3-204ENST00000475401 SNAPC4Q5SXM2 1469 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 IGKV3D-11A0A0A0MRZ8 115 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 TRAV8-3A0A0A6YYJ7 113 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 METTL15A6NJ78 407 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 OR5H1A6NKK0 313 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 TMEM250H0YL14 139 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 IGLV3-25P01717 112 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 HLA-DRAP01903 254 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 IFNA16P05015 189 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 HIST1H1EP10412 219 aaKnown RBP2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 AKR1C4P17516 323 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 PPP1R2P41236 205 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 RAP1GDS1P52306 607 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 CCL23P55773 120 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 CXCR4P61073 352 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 ARF6P62330 175 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 FLI1Q01543 452 aaPredicted RBP2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 TEX30Q5JUR7 227 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 PPP1R2P3Q6NXS1 205 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 SPINT4Q6UDR6 99 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 CLEC20AQ6ZU45 233 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 GALNT10Q86SR1 603 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 SLC25A29Q8N8R3 303 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 LINC00304Q8N9R0 145 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 ZNF555Q8NEP9 628 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 OR4M2Q8NGB6 313 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 SLC37A2Q8TED4 501 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 CDX2Q99626 313 aaPredicted RBP2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 MRPL20Q9BYC9 149 aaKnown RBP2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 SLC25A31Q9H0C2 315 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 PARP11Q9NR21 331 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 UBQLN4Q9NRR5 601 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 CA10Q9NS85 328 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 DMAC2Q9NW81 257 aa2.84□□□□□ -1.95
TM9SF3-204ENST00000475401 SETD1AO15047 1707 aaKnown RBP2.84□□□□□ -1.96
TM9SF3-204ENST00000475401 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.84□□□□□ -1.96
TM9SF3-204ENST00000475401 NOS1P29475 1434 aa2.84□□□□□ -1.96
TM9SF3-204ENST00000475401 ADGRL1O94910 1474 aa2.84□□□□□ -1.96
TM9SF3-204ENST00000475401 ZNF98A6NK75 572 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 CD300LBA8K4G0 201 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 BTNL10A8MVZ5 291 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 TCF21O43680 179 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 PLIN3O60664 434 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 SNRPAP09012 282 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 RPS12P25398 132 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 ELK4P28324 431 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 RPL12P30050 165 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 MIPP30301 263 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 IDH3GP51553 393 aaPredicted RBP2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 VBP1P61758 197 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 PPP1CAP62136 330 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 RANP62826 216 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 MRPS25P82663 173 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 GTF2BQ00403 316 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 AESQ08117 197 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 CLVS2Q5SYC1 327 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 STK40Q8N2I9 435 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 CHCHD7Q9BUK0 85 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 NUDT9Q9BW91 350 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 FBXL15Q9H469 300 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 HIVEP2P31629 2446 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 SCN1AP35498 2009 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 DYSFO75923 2080 aa2.83□□□□□ -1.96
TM9SF3-204ENST00000475401 IGHV2-26A0A0B4J1V2 119 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 H3BP45 60 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 KPNA3O00505 521 aaPredicted RBP2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 ZNF189O75820 626 aaPredicted RBP2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 GATBO75879 557 aaKnown RBP2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 OR2A4O95047 310 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 PRTN3P24158 256 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 SLCO1A2P46721 670 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 SMAGPQ0VAQ4 97 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 PAFAH1B3Q15102 231 aaKnown RBP2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 IGFBP7Q16270 282 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 SSX1Q16384 188 aa2.82□□□□□ -1.96
TM9SF3-204ENST00000475401 SPOPLQ6IQ16 392 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms