RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PSG11Q9UQ72 335 aa8.97□□□□□ -0.97
CKS1B-206ENST00000474215 AMMECR1Q9Y4X0 333 aaPredicted RBP8.97□□□□□ -0.97
CKS1B-206ENST00000474215 FAM90A10PA6NDY2 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A18PA6NE21 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A16PA6NEW6 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A20PA6NIJ5 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A7PA6NKC0 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A12PA8MX19 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A5PA8MXJ8 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A23PA8MXZ1 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 RGS10O43665 173 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 ORC5O43913 435 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 CRTAPO75718 401 aaPredicted RBP8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A15PP0C7V4 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A13PP0C7W8 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A14PP0C7W9 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A24PP0C7X0 464 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 MGMTP16455 207 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 SRMP19623 302 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FUT3P21217 361 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 HSPA13P48723 471 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 C2orf68Q2NKX9 166 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 FAM27D1Q5T7N8 215 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 RAB12Q6IQ22 244 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 IZUMO2Q6UXV1 221 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 Q6ZS46 218 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 C16orf82Q7Z2V1 217 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 CEACAM19Q7Z692 300 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 LRRTM1Q86UE6 522 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 OR52M1Q8NGK5 317 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 CCDC107Q8WV48 283 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 CAPSLQ8WWF8 208 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 ARL11Q969Q4 196 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 RPEQ96AT9 228 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 AKR1E2Q96JD6 320 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 LIN7BQ9HAP6 207 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 RCC2Q9P258 522 aaKnown RBP8.96□□□□□ -0.98
CKS1B-206ENST00000474215 PEX16Q9Y5Y5 336 aa8.96□□□□□ -0.98
CKS1B-206ENST00000474215 KIAA2026Q5HYC2 2103 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 C15orf65H3BRN8 121 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 AIPO00170 330 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 PEX14O75381 377 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 SC5DO75845 299 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 TSPAN15O95858 294 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 GLAP06280 429 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 CSF1P09603 554 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 UCHL1P09936 223 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 UBBP0CG47 229 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 FAM106CPP0CH98 169 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 CRHBPP24387 322 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 GNG10P50151 68 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 MADCAM1Q13477 382 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 TPBGQ13641 420 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 ARSJQ5FYB0 599 aaPredicted RBP8.95□□□□□ -0.98
CKS1B-206ENST00000474215 C1orf100Q5SVJ3 147 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 LIPKQ5VXJ0 399 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 GLT8D1Q68CQ7 371 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 THNSL2Q86YJ6 484 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 C11orf44Q8N8P7 122 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 UFD1Q92890 307 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 TOMM40LQ969M1 308 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 TMEM203Q969S6 136 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 Q96M66 194 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 RBM14Q96PK6 669 aaKnown RBP8.95□□□□□ -0.98
CKS1B-206ENST00000474215 WNT10AQ9GZT5 417 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 CCDC90BQ9GZT6 254 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 CST11Q9H112 138 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 ISYNA1Q9NPH2 558 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 ETAA1Q9NY74 926 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 TRAPPC2LQ9UL33 140 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 TRRAPQ9Y4A5 3859 aa8.95□□□□□ -0.98
CKS1B-206ENST00000474215 SDCBPO00560 298 aaPredicted RBP8.94□□□□□ -0.98
CKS1B-206ENST00000474215 CA11O75493 328 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 OR2F2O95006 317 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 HSMCR30P0CW71 290 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 CD37P11049 281 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 VHLP40337 213 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 RAB7AP51149 207 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 LOXL3P58215 753 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 HSD17B12Q53GQ0 312 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 RBM48Q5RL73 367 aaKnown RBP8.94□□□□□ -0.98
CKS1B-206ENST00000474215 SYT6Q5T7P8 510 aaPredicted RBP8.94□□□□□ -0.98
CKS1B-206ENST00000474215 SIGIRRQ6IA17 410 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 PRSS48Q7RTY5 328 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 GAPTQ8N292 157 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 C8orf31Q8N9H6 132 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 OR10X1Q8NGY0 326 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 OR4K15Q8NH41 348 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 FAM110DQ8TAY7 271 aaPredicted RBP8.94□□□□□ -0.98
CKS1B-206ENST00000474215 FAM46BQ96A09 425 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 OCSTAMPQ9BR26 566 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 SLC25A33Q9BSK2 321 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 RAB9BQ9NP90 201 aa8.94□□□□□ -0.98
CKS1B-206ENST00000474215 A0A1W2PPE3 182 aa8.93□□□□□ -0.98
CKS1B-206ENST00000474215 A0A1W2PPI3 338 aa8.93□□□□□ -0.98
CKS1B-206ENST00000474215 UBE2QL1A1L167 161 aa8.93□□□□□ -0.98
CKS1B-206ENST00000474215 FAM90A9PA6NNJ1 464 aa8.93□□□□□ -0.98
CKS1B-206ENST00000474215 C12orf77C9JDV5 145 aa8.93□□□□□ -0.98
CKS1B-206ENST00000474215 M0QZK8 103 aa8.93□□□□□ -0.98
CKS1B-206ENST00000474215 SPINT2O43291 252 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms