RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 GABARAPL1Q9H0R8 117 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 OR2AG1Q9H205 316 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 SSR3Q9UNL2 185 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 NHSL1Q5SYE7 1610 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 SLX4Q8IY92 1834 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 TAF1LQ8IZX4 1826 aa2.88□□□□□ -1.95
BRCA1-212ENST00000473961 DDX60LQ5H9U9 1706 aaKnown RBP2.88□□□□□ -1.95
BRCA1-212ENST00000473961 DICER1Q9UPY3 1922 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SCN11AQ9UI33 1791 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 BAZ2BQ9UIF8 2168 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 TNS3Q68CZ2 1445 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 IGLV1-50A0A075B6I6 118 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 MEIKINA0A087WXM9 373 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 IGLV1-36A0A0B4J1U3 117 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 A0A1B0GV90 55 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 C9orf170A2RU37 121 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 A8MU10 97 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 C1orf196B1AJZ1 125 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SMLR1H3BR10 107 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 FXYD1O00168 92 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 GABRPO00591 440 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 TCAPO15273 167 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF861PO60384 105 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 GADD45GO95257 159 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 CFDP00746 253 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SERPINA1P01009 418 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 PTHP01270 115 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 NMBP08949 121 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 HOXC4P09017 264 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 COX5BP10606 129 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 PRPS2P11908 318 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 DTYMKP23919 212 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 LCN1P31025 176 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SDC2P34741 201 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 DRD3P35462 400 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 RBM34P42696 430 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 MAGEA2P43356 314 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 PPICP45877 212 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 INPP1P49441 399 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 RBP2P50120 134 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 LHX2P50458 406 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF136P52737 540 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 RPS23P62266 143 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 PPP3R1P63098 170 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 DEFA5Q01523 94 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 RGNQ15493 299 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SAPCD1Q5SSQ6 148 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 LINC01551Q86U37 167 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ENTHD1Q8IYW4 607 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SLC34A3Q8N130 599 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SVBPQ8N300 66 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ARIH2OSQ8N7S6 290 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 OR4A15Q8NGL6 344 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 OR10G6Q8NH81 332 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF596Q8TC21 504 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 TMEM158Q8WZ71 300 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 TCEAL4Q96EI5 215 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 MRPS24Q96EL2 167 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 DIRAS2Q96HU8 199 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ZBED3Q96IU2 234 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 CCDC115Q96NT0 180 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 SCGB3A2Q96PL1 93 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 RNF157Q96PX1 679 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 CAMK2N2Q96S95 79 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 VAT1Q99536 393 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 TEAD3Q99594 435 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 PITX2Q99697 317 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 CDCA4Q9BXL8 241 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 TOLLIPQ9H0E2 274 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 METTL9Q9H1A3 318 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 OR51E2Q9H255 320 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 DHX35Q9H5Z1 703 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 NOX3Q9HBY0 568 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 METTL1Q9UBP6 276 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF222Q9UK12 451 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 CELA1Q9UNI1 258 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 PSG8Q9UQ74 426 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 BTRCQ9Y297 605 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ALS2Q96Q42 1657 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 ZFC3H1O60293 1989 aaKnown RBP2.87□□□□□ -1.95
BRCA1-212ENST00000473961 RGPD2P0DJD1 1756 aa2.87□□□□□ -1.95
BRCA1-212ENST00000473961 NRXN3Q9Y4C0 1643 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CAMTA1Q9Y6Y1 1673 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 TRAV19A0A0A6YYK7 116 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 IGHV5-51A0A0C4DH38 117 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 A0A1W2PQL4 384 aaPredicted RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 TRAPPC13A5PLN9 417 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 TMEM210A6NLX4 147 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ZNF670-ZNF695F2Z2N8 137 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 H7C417 338 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CD5LO43866 347 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SLC16A7O60669 478 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 SC5DO75845 299 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 ATG12O94817 140 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CATP04040 527 aaKnown RBP2.86□□□□□ -1.95
BRCA1-212ENST00000473961 CRYBA1P05813 215 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 BCHEP06276 602 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 GP1BAP07359 652 aa2.86□□□□□ -1.95
BRCA1-212ENST00000473961 RHOCP08134 193 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms