RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CBY1Q9Y3M2 126 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
C9orf3-214ENST00000473778 ARHGAP21Q5T5U3 1957 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 C5orf49A4QMS7 147 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 HSD17B6O14756 317 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 TCAPO15273 167 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 CDS2O95674 445 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 PMELP40967 661 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 NKX2-1P43699 371 aaPredicted RBP9.36□□□□□ -0.91
C9orf3-214ENST00000473778 PCBD1P61457 104 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 ZXDAP98168 799 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 TRA2AQ13595 282 aaKnown RBP eCLIP9.36□□□□□ -0.91
C9orf3-214ENST00000473778 GNMTQ14749 295 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 SP5Q6BEB4 398 aaPredicted RBP9.36□□□□□ -0.91
C9orf3-214ENST00000473778 DPPA2Q7Z7J5 298 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 TUSC5Q8IXB3 177 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF295-AS1Q8N0V1 137 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM217Q8N7C4 229 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 CCDC71LQ8N9Z2 235 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 CA5BP1Q8WTZ4 195 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 R4GN57 208 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
C9orf3-214ENST00000473778 BTBD17A6NE02 478 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 CXorf65A6NEN9 183 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 TUSC2O75896 110 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 CYB561P49447 251 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 FGF12P61328 243 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 IZUMO4Q1ZYL8 232 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 PCSK4Q6UW60 755 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 COMMD1Q8N668 190 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 OR5C1Q8NGR4 320 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 OR2G3Q8NGZ4 309 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 CD300LFQ8TDQ1 290 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 CT55Q8WUE5 264 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 TAAR9Q96RI9 348 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 SLC35B3Q9H1N7 401 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 PRO3102Q9H379 93 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 LYRM2Q9NU23 88 aaPredicted RBP9.35□□□□□ -0.91
C9orf3-214ENST00000473778 UBE2J1Q9Y385 318 aaPredicted RBP9.35□□□□□ -0.91
C9orf3-214ENST00000473778 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 GPR179Q6PRD1 2367 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 KIAA2026Q5HYC2 2103 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 MRPL33O75394 65 aaKnown RBP9.35□□□□□ -0.91
C9orf3-214ENST00000473778 NEURL1O76050 574 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 LHX2P50458 406 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 PAX9P55771 341 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 CYB5R2Q6BCY4 276 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 Q6ZS49 121 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 YPEL4Q96NS1 127 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 PRDM13Q9H4Q3 707 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 TAAR3PQ9P1P4 343 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 STRAPQ9Y3F4 350 aaKnown RBP9.35□□□□□ -0.91
C9orf3-214ENST00000473778 RNF115Q9Y4L5 304 aa9.35□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF732B4DXR9 585 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 PITX3O75364 302 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 IFNA10P01566 189 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 RAB5AP20339 215 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 S100A2P29034 98 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 DDTP30046 118 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 DYNLT3P51808 116 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 CLDN18P56856 261 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 OR2B8PP59922 312 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 RPS23P62266 143 aaKnown RBP9.34□□□□□ -0.91
C9orf3-214ENST00000473778 HMGN3Q15651 99 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-214ENST00000473778 C17orf78Q8N4C9 275 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 TMEM45BQ96B21 275 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 CALHM2Q9HA72 323 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 IGKV3D-15A0A087WSY6 115 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 SS18L1O75177 396 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-214ENST00000473778 TK1P04183 234 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 UCP1P25874 307 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 ID3Q02535 119 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF154Q13106 437 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 C3AR1Q16581 482 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 LPAL2Q16609 132 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 CEACAM21Q3KPI0 293 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 TCEAL6Q6IPX3 200 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 ADAM5Q6NVV9 412 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 MYPOPQ86VE0 399 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-214ENST00000473778 TECTBQ96PL2 329 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 ZNF703Q9H7S9 590 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-214ENST00000473778 TUBA4BQ9H853 241 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
C9orf3-214ENST00000473778 PUS1Q9Y606 427 aaKnown RBP eCLIP9.34□□□□□ -0.91
C9orf3-214ENST00000473778 CHD3Q12873 2000 aaKnown RBP9.33□□□□□ -0.92
C9orf3-214ENST00000473778 A0A087X0M5 115 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 A0A1B0GX30 115 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 CLEC18AA5D8T8 446 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 H3BP45 60 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 CHST1O43916 411 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 PCP4P48539 62 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 RND3P61587 244 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 PEAR1Q5VY43 1037 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-214ENST00000473778 WDR5BQ86VZ2 330 aa9.33□□□□□ -0.92
C9orf3-214ENST00000473778 TGIF2LXQ8IUE1 241 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms