RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 OR52J3Q8NH60 311 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 COQ8AQ8NI60 647 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 LRRC29Q8WV35 223 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 ST8SIA2Q92186 375 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 ALX4Q9H161 411 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 RNF167Q9H6Y7 350 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 RAB18Q9NP72 206 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 NUDT15Q9NV35 164 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 ABRACLQ9P1F3 81 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 ENPP4Q9Y6X5 453 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 NKX6-3A6NJ46 265 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 LINC00587B1AMM8 73 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 MCRIP1C9JLW8 97 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 SMLR1H3BR10 107 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 H3BUX3 64 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 UBE2CO00762 179 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 XRCC2O43543 280 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 HPGDSO60760 199 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 KDM4BO94953 1096 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 OR2A4O95047 310 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 GADD45GO95257 159 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 LHBP01229 141 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 IFNGP01579 166 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 VSIG10L2P0DP72 767 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 RPA2P15927 270 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 HIST1H1CP16403 213 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 GNALP38405 381 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 KIR2DS4P43632 304 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 PRKXP51817 358 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 UBE2E1P51965 193 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 LOXL3P58215 753 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 FXYD6P3P58550 94 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 MXD1Q05195 221 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 KLRD1Q13241 179 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 PTGES3Q15185 160 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 LY6EQ16553 131 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 GLYATL3Q5SZD4 288 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 LIPKQ5VXJ0 399 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 C22orf42Q6IC83 251 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 TMUB2Q71RG4 321 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 SSX9Q7RTT3 188 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 FGFRL1Q8N441 504 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 KLHDC1Q8N7A1 406 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 FAM216BQ8N7L0 139 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 LY6G5BQ8NDX9 201 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 SDR9C7Q8NEX9 313 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 OR56B2PQ8NGI1 322 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 MRPL48Q96GC5 212 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 C7orf34Q96L11 122 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 OR2A7Q96R45 310 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 SSX3Q99909 188 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 DCTN5Q9BTE1 182 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 PAPOLGQ9BWT3 736 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 TSSK6Q9BXA6 273 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 OR52D1Q9H346 318 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 METTL8Q9H825 291 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 PNRC2Q9NPJ4 139 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 NIT2Q9NQR4 276 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 SMCO4Q9NRQ5 59 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 CENPMQ9NSP4 180 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 NECAP2Q9NVZ3 263 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 METTL1Q9UBP6 276 aaKnown RBP5.66□□□□□ -1.5
CKS1B-205ENST00000473344 KCNG2Q9UJ96 466 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 FOXJ3Q9UPW0 622 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 SIGLEC9Q9Y336 463 aa5.66□□□□□ -1.5
CKS1B-205ENST00000473344 TRBV4-1A0A0J9YWV2 114 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 KANTRA0A1W2PQU2 76 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 OR6C68A6NDL8 312 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 CDIPTO14735 213 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 ARPC3O15145 178 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 CLN5O75503 358 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 FCN3O75636 299 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 ALDOBP05062 364 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 LPLP06858 475 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 ANXA2P07355 339 aaKnown RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 SPARCP09486 303 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 NDUFB7P17568 137 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 HSD11B1P28845 292 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 RPS27P42677 84 aaKnown RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 EFNB2P52799 333 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 CAPZA1P52907 286 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 HCCSP53701 268 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 DLX1P56177 255 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 SPCS3P61009 180 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 PEA15Q15121 130 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 NSUN5P1Q3KNT7 163 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 C12orf73Q69YU5 71 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 EIF5AL1Q6IS14 154 aaKnown RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 LPCAT3Q6P1A2 487 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 DUX4L9Q6RFH8 374 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 WDR82Q6UXN9 313 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 DCXRQ7Z4W1 244 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 PNKDQ8N490 385 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 Q8N7P7 452 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF565Q8N9K5 539 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 BEND2Q8NDZ0 799 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 OR11H4Q8NGC9 324 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 PPP1R35Q8TAP8 253 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 THAP6Q8TBB0 222 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 GNPDA2Q8TDQ7 276 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms