RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 HSMCR30P0CW71 290 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 JUNBP17275 347 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-226ENST00000473066 GZMHP20718 246 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 HSD17B12Q53GQ0 312 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 RAB12Q6IQ22 244 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 CCBE1Q6UXH8 406 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-226ENST00000473066 PHYHIPQ92561 330 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 ARL11Q969Q4 196 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 BANF2Q9H503 90 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 ETAA1Q9NY74 926 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 ZNF581Q9P0T4 197 aa12.54□□□□□ -0.4
MRPL55-226ENST00000473066 TRAV39A0A0B4J263 110 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 NPIPB11E5RHQ5 1161 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 J3QR06 171 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 CGB3P0DN86 165 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 CGB7P0DN87 165 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-226ENST00000473066 MADCAM1Q13477 382 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 IRF3Q14653 427 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 TRAM1Q15629 374 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 LIPKQ5VXJ0 399 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 SLC16A12Q6ZSM3 486 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 CEACAM19Q7Z692 300 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 OR10X1Q8NGY0 326 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 SGCDQ92629 289 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 LEAP2Q969E1 77 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 FAM46BQ96A09 425 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 CNBD2Q96M20 576 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 SLC25A33Q9BSK2 321 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 DUSP21Q9H596 190 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 LIN7BQ9HAP6 207 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 RCC2Q9P258 522 aaKnown RBP12.53□□□□□ -0.4
MRPL55-226ENST00000473066 TRAPPC2LQ9UL33 140 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 PEX16Q9Y5Y5 336 aa12.53□□□□□ -0.4
MRPL55-226ENST00000473066 SDCBPO00560 298 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-226ENST00000473066 SPINT2O43291 252 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 MPIG6BO95866 241 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 IGHV3-7P01780 117 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 CSF1P09603 554 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 PSMA1P25786 263 aaKnown RBP12.52□□□□□ -0.41
MRPL55-226ENST00000473066 INSL4Q14641 139 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 UNQ9370/PRO34162Q6UXP9 181 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 PRSS48Q7RTY5 328 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 Q96M66 194 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 PSG11Q9UQ72 335 aa12.52□□□□□ -0.41
MRPL55-226ENST00000473066 ORC5O43913 435 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 FBXO24O75426 580 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 CA11O75493 328 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 ARL6IP5O75915 188 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 OR2F2O95006 317 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 FUT3P21217 361 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 CRHBPP24387 322 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 CD24P25063 80 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 IL3RAP26951 378 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 RAB7AP51149 207 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 MLLT11Q13015 90 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-226ENST00000473066 HABP2Q14520 560 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-226ENST00000473066 TMEM30BQ3MIR4 351 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 NKAPLQ5M9Q1 402 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 Q8N2B8 174 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 OR52M1Q8NGK5 317 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 TMEM203Q969S6 136 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 TMEM59Q9BXS4 323 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 RAB26Q9ULW5 256 aa12.51□□□□□ -0.41
MRPL55-226ENST00000473066 M0QZK8 103 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 PDCD6O75340 191 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 TSPAN15O95858 294 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 MT-ND4P03905 459 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 GLAP06280 429 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 LPLP06858 475 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 UCHL1P09936 223 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 FAM106CPP0CH98 169 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 SRMP19623 302 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 HTR2CP28335 458 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 VHLP40337 213 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 HES1Q14469 280 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 SYT6Q5T7P8 510 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-226ENST00000473066 LYPD6Q86Y78 171 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 OR6M1Q8NGM8 313 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 OR4K15Q8NH41 348 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 UBALD1Q8TB05 177 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 NEDD4LQ96PU5 975 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 Q9H521 79 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 PLGRKTQ9HBL7 147 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 SERTAD4Q9NUC0 356 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 GFOD1Q9NXC2 390 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 KCNIP1Q9NZI2 227 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
MRPL55-226ENST00000473066 UBE2QL1A1L167 161 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms