RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 SERPINA2P20848 420 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 ZNF93P35789 620 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-210ENST00000472880 SLC35B1P78383 322 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 XAF1Q6GPH4 301 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 TMPRSS11AQ6ZMR5 421 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 SLC35E3Q7Z769 313 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 LINC00596Q86U02 117 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 SETD9Q8NE22 299 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 OR52N1Q8NH53 320 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 IFT22Q9H7X7 185 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 DCLRE1BQ9H816 532 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 FGF20Q9NP95 211 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-210ENST00000472880 PAK1IP1Q9NWT1 392 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-210ENST00000472880 ZNF581Q9P0T4 197 aa15.64■□□□□ 0.09
COL9A3-210ENST00000472880 CCRL2O00421 344 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 GZMHP20718 246 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 BDKRB2P30411 391 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 ZNF816Q0VGE8 651 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-210ENST00000472880 ETV3LQ6ZN32 361 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 OR2W3Q7Z3T1 314 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 MOB3BQ86TA1 216 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 FOXRED2Q8IWF2 684 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 MRPL41Q8IXM3 137 aaKnown RBP15.63■□□□□ 0.09
COL9A3-210ENST00000472880 NEK7Q8TDX7 302 aa15.63■□□□□ 0.09
COL9A3-210ENST00000472880 SDCBPO00560 298 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-210ENST00000472880 GEMIN2O14893 280 aaKnown RBP15.62■□□□□ 0.09
COL9A3-210ENST00000472880 GAPDHP04406 335 aaKnown RBP15.62■□□□□ 0.09
COL9A3-210ENST00000472880 DCKP27707 260 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 SLC6A1P30531 599 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 HOXD3P31249 432 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-210ENST00000472880 REG1BP48304 166 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 ETV1P50549 477 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 KRTAP10-11P60412 298 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 MPV17LQ2QL34 196 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 DEFB121Q5J5C9 76 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 ATAD3CQ5T2N8 411 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 OR2G6Q5TZ20 316 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 COMMD1Q8N668 190 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 KLHL30-AS1Q8NEE0 82 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 ARL11Q969Q4 196 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 SMIM19Q96E16 107 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 ZFP57Q9NU63 452 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 NKX1-2Q9UD57 310 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-210ENST00000472880 LINC00527Q9UJ94 153 aa15.62■□□□□ 0.09
COL9A3-210ENST00000472880 IGHV1-3A0A0C4DH29 117 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 WI2-2373I1.2A0A1W2PRP0 233 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 IRGMA1A4Y4 181 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 ERICH4A6NGS2 130 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 ZNF780AO75290 641 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-210ENST00000472880 IGHG2P01859 326 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 MYL12AP19105 171 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 IL3RAP26951 378 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 CAPGP40121 348 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 THBS3P49746 956 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 EGFEM1PQ0D2K5 195 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 RIPK1Q13546 671 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 C8orf86Q6ZUL3 223 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 IZUMO1Q8IYV9 350 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 OR52M1Q8NGK5 317 aa15.61■□□□□ 0.09
COL9A3-210ENST00000472880 MCRIP2Q9BUT9 160 aaKnown RBP15.61■□□□□ 0.09
COL9A3-210ENST00000472880 IGHV3-72A0A0B4J1Y9 119 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 NCBP2LA6PVI3 153 aaKnown RBP15.6■□□□□ 0.09
COL9A3-210ENST00000472880 C15orf65H3BRN8 121 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 GTF2F2P13984 249 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 SLC22A6Q4U2R8 563 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 STPG2Q8N412 459 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 STX19Q8N4C7 294 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 UBALD1Q8TB05 177 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 CCDC107Q8WV48 283 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 EAF1Q96JC9 268 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-210ENST00000472880 ZNF184Q99676 751 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-210ENST00000472880 VCXQ9H320 206 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 CKLFQ9UBR5 152 aa15.6■□□□□ 0.09
COL9A3-210ENST00000472880 AIPO00170 330 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 GNAO1P09471 354 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 MYCNOSP40205 109 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 EBI3Q14213 229 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 VAX1Q5SQQ9 334 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 C18orf65Q6ZTR6 163 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 TGIF2LXQ8IUE1 241 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 C8orf59Q8N0T1 100 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-210ENST00000472880 LINC00311Q8N616 119 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 OR13C5Q8NGS8 318 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 OR2T10Q8NGZ9 312 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 ORAI1Q96D31 301 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 GFOD1Q9NXC2 390 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 BABAM2Q9NXR7 383 aa15.59■□□□□ 0.09
COL9A3-210ENST00000472880 DIMT1Q9UNQ2 313 aaKnown RBP15.59■□□□□ 0.09
COL9A3-210ENST00000472880 EXOSC1Q9Y3B2 195 aaKnown RBP15.59■□□□□ 0.09
COL9A3-210ENST00000472880 SIRT4Q9Y6E7 314 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-210ENST00000472880 IGHV3-43A0A0B4J1X8 118 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 A0A1W2PP11 408 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 AP4M1O00189 453 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 OGG1O15527 345 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 ORC5O43913 435 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 IGHV3-43DP0DP04 118 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 MED21Q13503 144 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 GPR176Q14439 515 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 ZNF497Q6ZNH5 498 aa15.58■□□□□ 0.08
COL9A3-210ENST00000472880 ZNF695Q8IW36 515 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms