RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 VAMP5O95183 116 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 CLIC3O95833 236 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 IGKV1D-16P01601 117 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 OR4E1P0C645 316 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 IGLL1P15814 213 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 ZNF12P17014 697 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 RPL35AP18077 110 aaKnown RBP5.37□□□□□ -1.55
SCAF4-205ENST00000472318 MRPS11P82912 194 aaKnown RBP5.37□□□□□ -1.55
SCAF4-205ENST00000472318 RPL24P83731 157 aaKnown RBP5.37□□□□□ -1.55
SCAF4-205ENST00000472318 UNC50Q53HI1 259 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 ZNF620Q6ZNG0 422 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 LRP11Q86VZ4 500 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 HS3ST5Q8IZT8 346 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 ZFP82Q8N141 532 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 CCDC71LQ8N9Z2 235 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 OR52E2Q8NGJ4 325 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 OR9A2Q8NGT5 310 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 RNASEH2CQ8TDP1 164 aaKnown RBP5.37□□□□□ -1.55
SCAF4-205ENST00000472318 TCTEX1D2Q8WW35 142 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 CNRIP1Q96F85 164 aaPredicted RBP5.37□□□□□ -1.55
SCAF4-205ENST00000472318 CCDC42Q96M95 316 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 PACRGQ96M98 296 aaPredicted RBP5.37□□□□□ -1.55
SCAF4-205ENST00000472318 SLC7A10Q9NS82 523 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 CLN6Q9NWW5 311 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 ZNF224Q9NZL3 707 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 PAK5Q9P286 719 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 LGALS13Q9UHV8 139 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 KCNG2Q9UJ96 466 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 FBXL3Q9UKT7 428 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 TCF19Q9Y242 345 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 INSIG2Q9Y5U4 225 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 CACNG2Q9Y698 323 aa5.37□□□□□ -1.55
SCAF4-205ENST00000472318 IGLV9-49A0A0B4J1Y8 123 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 ANKRD20A5PA0PJZ0 165 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 STK16O75716 305 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 LYPD3O95274 346 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 IFNA14P01570 189 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 IGLV1-44P01699 117 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 HBE1P02100 147 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 ORM1P02763 201 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 SERPINA5P05154 406 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 MELTFP08582 738 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 CSNK2A2P19784 350 aaPredicted RBP5.36□□□□□ -1.55
SCAF4-205ENST00000472318 SERPINA2P20848 420 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 ELK4P28324 431 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 SERPINB1P30740 379 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 MAGEA3P43357 314 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 RPL8P62917 257 aaKnown RBP5.36□□□□□ -1.55
SCAF4-205ENST00000472318 PSPHP78330 225 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 TRIP13Q15645 432 aaPredicted RBP5.36□□□□□ -1.55
SCAF4-205ENST00000472318 TAL2Q16559 108 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 PDZD11Q5EBL8 140 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 TSPO2Q5TGU0 170 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 BRD3OSQ6XYD6 125 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 PGAP1Q75T13 922 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 PRSS48Q7RTY5 328 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 KIRREL3Q8IZU9 778 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 LYG1Q8N1E2 194 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 ABHD12Q8N2K0 398 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 LFNGQ8NES3 379 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 OR5B3Q8NH48 314 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 ZNF675Q8TD23 568 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 PYROXD1Q8WU10 500 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 RAB3CQ96E17 227 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 NKX3-1Q99801 234 aaPredicted RBP5.36□□□□□ -1.55
SCAF4-205ENST00000472318 OVOL2Q9BRP0 275 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 C16orf95Q9H693 158 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 SDHAF2Q9NX18 166 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 RHBDL2Q9NX52 303 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 BABAM2Q9NXR7 383 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 CYB5R1Q9UHQ9 305 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
SCAF4-205ENST00000472318 HEATR1Q9H583 2144 aaKnown RBP5.35□□□□□ -1.55
SCAF4-205ENST00000472318 TRAV40A0A0B4J280 105 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 IGHV2OR16-5A0A0B4J2B6 119 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ZNF816-ZNF321PA0A0X1KG74 233 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 GJE1A6NN92 205 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ATP8B1O43520 1251 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 MRPL33O75394 65 aaKnown RBP5.35□□□□□ -1.55
SCAF4-205ENST00000472318 FOXH1O75593 365 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 DDOSTP39656 456 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 EIF1P41567 113 aaKnown RBP5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ELK3P41970 407 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 TFPI2P48307 235 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 EVX1P49640 407 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 BRWD1-AS2P59051 145 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ERVS71-1P61550 626 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ZNF85Q03923 595 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 PAX8Q06710 450 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 PDIA2Q13087 525 aaKnown RBP5.35□□□□□ -1.55
SCAF4-205ENST00000472318 HERPUD1Q15011 391 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 TOMM34Q15785 309 aaPredicted RBP5.35□□□□□ -1.55
SCAF4-205ENST00000472318 GUK1Q16774 197 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 RFX4Q33E94 735 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 BSXQ3C1V8 233 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 GCSAMLQ5JQS6 135 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 OGFRL1Q5TC84 451 aaPredicted RBP5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ZFAND6Q6FIF0 208 aa5.35□□□□□ -1.55
SCAF4-205ENST00000472318 ENTHD1Q8IYW4 607 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms