RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 DENRO43583 198 aaKnown RBP12.15□□□□□ -0.46
CALD1-215ENST00000472096 CHST1O43916 411 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 FBXO24O75426 580 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 CRTAPO75718 401 aaPredicted RBP12.15□□□□□ -0.46
CALD1-215ENST00000472096 TSPAN9O75954 239 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 IGLV1-47P01700 117 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 UBBP0CG47 229 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 JUNBP17275 347 aaPredicted RBP12.15□□□□□ -0.46
CALD1-215ENST00000472096 SRMP19623 302 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 NFYBP25208 207 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 HTR1DP28221 377 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 SSTR5P35346 364 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 HLA-DRB5Q30154 266 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 C1orf100Q5SVJ3 147 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 UTF1Q5T230 341 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 CST11Q9H112 138 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 C16orf95Q9H693 158 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 LINC00574Q9H8X3 128 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 ACOT13Q9NPJ3 140 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 IDI2-AS1Q9NZ38 188 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 GHRLQ9UBU3 117 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 TCF19Q9Y242 345 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
CALD1-215ENST00000472096 RNF114Q9Y508 228 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 HILPDAQ9Y5L2 63 aa12.15□□□□□ -0.46
CALD1-215ENST00000472096 NPIPB11E5RHQ5 1161 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 GABRA5P31644 462 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 DYNLT3P51808 116 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 FABP5Q01469 135 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 SSX1Q16384 188 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 SIGIRRQ6IA17 410 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 RAB12Q6IQ22 244 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 FAM46BQ96A09 425 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 ABCB10Q9NRK6 738 aa12.14□□□□□ -0.47
CALD1-215ENST00000472096 A6NDX4 124 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 AIPO00170 330 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 F2RL2O00254 374 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 SLC22A1O15245 554 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 MRPS14O60783 128 aaKnown RBP12.13□□□□□ -0.47
CALD1-215ENST00000472096 ARL6IP5O75915 188 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 MPIG6BO95866 241 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 CD37P11049 281 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 HTR2CP28335 458 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 RAB13P51153 203 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 PROK1P58294 105 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 EMX1Q04741 257 aaPredicted RBP12.13□□□□□ -0.47
CALD1-215ENST00000472096 RBM39Q14498 530 aaKnown RBP12.13□□□□□ -0.47
CALD1-215ENST00000472096 OR10A7Q8NGE5 316 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 OR6M1Q8NGM8 313 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 SGMS2Q8NHU3 365 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 GFI1Q99684 422 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 KCNK15Q9H427 330 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 RANBP3Q9H6Z4 567 aaPredicted RBP12.13□□□□□ -0.47
CALD1-215ENST00000472096 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 DPM3Q9P2X0 92 aa12.13□□□□□ -0.47
CALD1-215ENST00000472096 LEUTXA8MZ59 168 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 C15orf65H3BRN8 121 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 TOR1AO14656 332 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 SRSF4Q08170 494 aaKnown RBP12.12□□□□□ -0.47
CALD1-215ENST00000472096 UNC119Q13432 240 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 LTC4SQ16873 150 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 OR10K2Q6IF99 312 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 CCBE1Q6UXH8 406 aaPredicted RBP12.12□□□□□ -0.47
CALD1-215ENST00000472096 TMEM219Q86XT9 240 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 GAPTQ8N292 157 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 OR4C13Q8NGP0 309 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 RFESDQ8TAC1 157 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 CCDC107Q8WV48 283 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 CREB3L1Q96BA8 519 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 CYYR1Q96J86 154 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 TMEM59Q9BXS4 323 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 MMP28Q9H239 520 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 ETAA1Q9NY74 926 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 PEX16Q9Y5Y5 336 aa12.12□□□□□ -0.47
CALD1-215ENST00000472096 LY6LH3BQJ8 138 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 BUB1B-PAK6H3BSN5 160 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 J3QR06 171 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 SLC17A2O00624 439 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 PDCD6O75340 191 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 BPNT1O95861 308 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 MT-ND4P03905 459 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 GZMHP20718 246 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 FUT3P21217 361 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 CALRP27797 417 aaKnown RBP12.11□□□□□ -0.47
CALD1-215ENST00000472096 CEACAM3P40198 252 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 PRRX1P54821 245 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 KRTAP10-3P60369 221 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 RPS27AP62979 156 aaKnown RBP12.11□□□□□ -0.47
CALD1-215ENST00000472096 TPTE2P1Q5T6R2 138 aa12.11□□□□□ -0.47
CALD1-215ENST00000472096 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms