RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 IGFBP3P17936 291 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-213ENST00000471978 SLC35A2P78381 396 aa17.88■□□□□ 0.45
C9orf3-213ENST00000471978 ATAD3CQ5T2N8 411 aa17.88■□□□□ 0.45
C9orf3-213ENST00000471978 C5orf56Q8N8D9 126 aa17.88■□□□□ 0.45
C9orf3-213ENST00000471978 TMEM80Q96HE8 168 aa17.88■□□□□ 0.45
C9orf3-213ENST00000471978 ZNF184Q99676 751 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-213ENST00000471978 CHCHD3Q9NX63 227 aaKnown RBP17.88■□□□□ 0.45
C9orf3-213ENST00000471978 TRBV5-5A0A0J9YX44 114 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 IGKV1D-33P01593 117 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 IGKV1-33P01594 117 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 MED21Q13503 144 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 LRRC36Q1X8D7 754 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 MPV17LQ2QL34 196 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 SLC22A6Q4U2R8 563 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 TTC23Q5W5X9 447 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 DMKNQ6E0U4 476 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-213ENST00000471978 NEK7Q8TDX7 302 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 CCDC107Q8WV48 283 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 ARL11Q969Q4 196 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 CKLFQ9UBR5 152 aa17.87■□□□□ 0.45
C9orf3-213ENST00000471978 A0A1W2PP11 408 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 HSD17B6O14756 317 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 FGF16O43320 207 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 GTF2F2P13984 249 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 Q499Y3 187 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 YIF1BQ5BJH7 314 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 ZNF329Q86UD4 541 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 ZFP41Q8N8Y5 198 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 SETD9Q8NE22 299 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 UBALD1Q8TB05 177 aa17.86■□□□□ 0.45
C9orf3-213ENST00000471978 MAGEA13PA6NCF6 341 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 C15orf65H3BRN8 121 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 CCRL2O00421 344 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 SDCBPO00560 298 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-213ENST00000471978 GPX5O75715 221 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 GAPDHP04406 335 aaKnown RBP17.85■□□□□ 0.45
C9orf3-213ENST00000471978 RPS11P62280 158 aaKnown RBP eCLIP17.85■□□□□ 0.45
C9orf3-213ENST00000471978 ZNF816Q0VGE8 651 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-213ENST00000471978 GPR176Q14439 515 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 MOB3BQ86TA1 216 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 OR52M1Q8NGK5 317 aa17.85■□□□□ 0.45
C9orf3-213ENST00000471978 RCC1LQ96I51 464 aaKnown RBP17.85■□□□□ 0.45
C9orf3-213ENST00000471978 NOL4LQ96MY1 436 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-213ENST00000471978 TRAV8-7A0A075B6U6 113 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 IGHV1-3A0A0C4DH29 117 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 SERPINE3A8MV23 424 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 MT-ND4P03905 459 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 REG1BP48304 166 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 ZNF497Q6ZNH5 498 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 STX19Q8N4C7 294 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 ZNF485Q8NCK3 441 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 CHPT1Q8WUD6 406 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 GGHQ92820 318 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 MUL1Q969V5 352 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 PGLYRP3Q96LB9 341 aa17.84■□□□□ 0.45
C9orf3-213ENST00000471978 A0A1W2PPK0 400 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 AIPO00170 330 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 ORC5O43913 435 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 FSTP19883 344 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 ADARB1P78563 741 aaKnown RBP17.83■□□□□ 0.44
C9orf3-213ENST00000471978 ST3GAL4Q11206 333 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 DHRSXQ8N5I4 330 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 JAGN1Q8N5M9 183 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 LINC00311Q8N616 119 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 OR14A2Q96R54 314 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 SPACA1Q9HBV2 294 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 C8orf4Q9NR00 106 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 GFOD1Q9NXC2 390 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 LINC00527Q9UJ94 153 aa17.83■□□□□ 0.44
C9orf3-213ENST00000471978 MRPS28Q9Y2Q9 187 aaKnown RBP17.83■□□□□ 0.44
C9orf3-213ENST00000471978 IGHV3-43A0A0B4J1X8 118 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 IGHV3-72A0A0B4J1Y9 119 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 PNMA8CA0A1B0GUJ8 204 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 DUS4LO95620 317 aaKnown RBP17.82■□□□□ 0.44
C9orf3-213ENST00000471978 MPIG6BO95866 241 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 IGHV3-43DP0DP04 118 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 EBI3Q14213 229 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 FAM53AQ6NSI3 398 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-213ENST00000471978 GLIPR1L1Q6UWM5 242 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 SLC35E3Q7Z769 313 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 PACRGLQ8N7B6 248 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 C8orf31Q8N9H6 132 aa17.82■□□□□ 0.44
C9orf3-213ENST00000471978 EAF1Q96JC9 268 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-213ENST00000471978 TRBV5-7A0A0A0MS05 114 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 NCBP2LA6PVI3 153 aaKnown RBP17.81■□□□□ 0.44
C9orf3-213ENST00000471978 MCRIP1C9JLW8 97 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 IGHG2P01859 326 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 TAS2R43P59537 309 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 RPL23AP62750 156 aaKnown RBP17.81■□□□□ 0.44
C9orf3-213ENST00000471978 IZUMO1Q8IYV9 350 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 LINC00482Q8N8I6 264 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 OR51D1Q8NGF3 324 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 MRPS24Q96EL2 167 aaKnown RBP17.81■□□□□ 0.44
C9orf3-213ENST00000471978 RCC2Q9P258 522 aaKnown RBP17.81■□□□□ 0.44
C9orf3-213ENST00000471978 TRAPPC2LQ9UL33 140 aa17.81■□□□□ 0.44
C9orf3-213ENST00000471978 EFCAB10A6NFE3 127 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 MAS1P04201 325 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 IL3RAP26951 378 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 SLC35B1P78383 322 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 SYT6Q5T7P8 510 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms