RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 HMGN2P05204 90 aaKnown RBP3.96□□□□□ -1.78
CKS1B-204ENST00000471245 EIF1P41567 113 aaKnown RBP3.96□□□□□ -1.78
CKS1B-204ENST00000471245 GPR6P46095 362 aaPredicted RBP3.96□□□□□ -1.78
CKS1B-204ENST00000471245 GSSP48637 474 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 SERPINB9P50453 376 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 P2RX1P51575 399 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 DLX1P56177 255 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 ERVK-25P63136 954 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 SELENBP1Q13228 472 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 SKP2Q13309 424 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 QPRTQ15274 297 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 MAPK14Q16539 360 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 Q3ZCU0 254 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 ATP6AP1LQ52LC2 224 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 CLEC6AQ6EIG7 209 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 C22orf42Q6IC83 251 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 TIFABQ6ZNK6 161 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 TMPPEQ6ZT21 453 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 ZNF546Q86UE3 836 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 C17orf78Q8N4C9 275 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 COX18Q8N8Q8 333 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 OR4A4PQ8NGN8 299 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 STMN2Q93045 179 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 APH1AQ96BI3 265 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 C16orf74Q96GX8 76 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 MS4A4EQ96PG1 132 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 TSSK3Q96PN8 268 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 SHCBP1LQ9BZQ2 653 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 TPK1Q9H3S4 243 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 PLGRKTQ9HBL7 147 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 AIG1Q9NVV5 245 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 KCNIP1Q9NZI2 227 aa3.96□□□□□ -1.78
CKS1B-204ENST00000471245 NOSIPQ9Y314 301 aaKnown RBP3.96□□□□□ -1.78
CKS1B-204ENST00000471245 UTP11Q9Y3A2 253 aaKnown RBP3.96□□□□□ -1.78
CKS1B-204ENST00000471245 EPPK1P58107 5090 aaKnown RBP3.96□□□□□ -1.78
CKS1B-204ENST00000471245 SIRPB1O00241 398 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 NDUFAB1O14561 156 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 AGPAT2O15120 278 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 HDAC3O15379 428 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 PIN1P1O15428 100 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 MRPL33O75394 65 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 MPZL1O95297 269 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 SNRPAP09012 282 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 STAG3L2P0CL84 134 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 PRKACBP22694 351 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OMGP23515 440 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 COL8A2P25067 703 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 GTF2E2P29084 291 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 LCN1P31025 176 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 MRPL19P49406 292 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 BCAP31P51572 246 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 PRPS1P60891 318 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 H3F3AP84243 136 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 FUT5Q11128 374 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 ATP6AP1Q15904 470 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 KRT71Q3SY84 523 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 HSP90B2PQ58FF3 399 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 CASC10Q5T4H9 136 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 TSPO2Q5TGU0 170 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 SLC16A14Q7RTX9 510 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 MTERF4Q7Z6M4 381 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 HMGN2P46Q86SG4 172 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 MMGT1Q8N4V1 131 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 C11orf42Q8N5U0 333 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 MS4A15Q8N5U1 240 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 CCNYL1Q8N7R7 359 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 ZIC4Q8N9L1 334 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 PROKR2Q8NFJ6 384 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OR5D16Q8NGK9 328 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OR5W2Q8NH69 310 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 ATP6V1G3Q96LB4 118 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OR8B4Q96RC9 309 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 STACQ99469 402 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 SDF2Q99470 211 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 KCNS3Q9BQ31 491 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OR11A1Q9GZK7 315 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 POLR2J2Q9GZM3 115 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 POLR2J3Q9H1A7 115 aaKnown RBP3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OR51M1Q9H341 326 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OR51J1Q9H342 316 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 PIGUQ9H490 435 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 SLC25A22Q9H936 323 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 DYNLRB1Q9NP97 96 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 CTPS2Q9NRF8 586 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 EMC3Q9P0I2 261 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 OPN4Q9UHM6 478 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 CDH10Q9Y6N8 788 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 TENM3Q9P273 2699 aa3.95□□□□□ -1.78
CKS1B-204ENST00000471245 NOTCH3Q9UM47 2321 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 TET2Q6N021 2002 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 A0A0G2JMP0 313 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 A0A0X1KG70 313 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 CLDN24A6NM45 220 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 J3QLI3 93 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 SCAMP2O15127 329 aaKnown RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 SOX15O60248 233 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 EIF4E2O60573 245 aaKnown RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 MMP23AO75900 390 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 C6orf47O95873 294 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms