RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SOCS1O15524 211 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 AIREO43918 545 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 BLVRBP30043 206 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-220ENST00000471235 TGFBR1P36897 503 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 MXD1Q05195 221 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 OR52W1Q6IF63 320 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 GDPGP1Q6ZNW5 385 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 C6orf201Q7Z4U5 140 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 FAM89BQ8N5H3 189 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-220ENST00000471235 OR13F1Q8NGS4 319 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 OR4K15Q8NH41 348 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 ZFAND2BQ8WV99 257 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 KIRREL1Q96J84 757 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 CLEC7AQ9BXN2 247 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 MRPS26Q9BYN8 205 aaKnown RBP16.05■□□□□ 0.16
HDAC7-220ENST00000471235 LINC00574Q9H8X3 128 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 IDI2-AS1Q9NZ38 188 aa16.05■□□□□ 0.16
HDAC7-220ENST00000471235 NPIPB11E5RHQ5 1161 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 CLDN34H7C241 214 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 CA11O75493 328 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 PAHP00439 452 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 CD34P28906 385 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 EFNB2P52799 333 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 DYNC1I2Q13409 638 aaKnown RBP16.04■□□□□ 0.16
HDAC7-220ENST00000471235 LDLRAD2Q5SZI1 272 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 UTF1Q5T230 341 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 SFXN4Q6P4A7 337 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 LHFPL4Q7Z7J7 247 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 FAAP24Q9BTP7 215 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 C19orf24Q9BVV8 132 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 ZNF286AQ9HBT8 521 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 RAB22AQ9UL26 194 aa16.04■□□□□ 0.16
HDAC7-220ENST00000471235 A0A087X0M5 115 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 A0A1B0GX30 115 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 C15orf65H3BRN8 121 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 IGHV4-59P01825 116 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 RNASE1P07998 156 aaKnown RBP16.03■□□□□ 0.16
HDAC7-220ENST00000471235 NFYBP25208 207 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 VEGFCP49767 419 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 LGALS4P56470 323 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 BEND2Q8NDZ0 799 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 RFESDQ8TAC1 157 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 MRPL30Q8TCC3 161 aaKnown RBP16.03■□□□□ 0.16
HDAC7-220ENST00000471235 FAM216AQ8WUB2 273 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 FUNDC2Q9BWH2 189 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 DAPK2Q9UIK4 370 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 TRAPPC2LQ9UL33 140 aa16.03■□□□□ 0.16
HDAC7-220ENST00000471235 TBL2Q9Y4P3 447 aaKnown RBP16.03■□□□□ 0.16
HDAC7-220ENST00000471235 RAB6AP20340 208 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 PAX6P26367 422 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 IER3P46695 156 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 LSM3P62310 102 aaKnown RBP16.02■□□□□ 0.16
HDAC7-220ENST00000471235 LTC4SQ16873 150 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 ABHD12Q8N2K0 398 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 TMEM86BQ8N661 226 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 OR56B1Q8NGI3 324 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 UBALD1Q8TB05 177 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 SSMEM1Q8WWF3 244 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 TNFRSF19Q9NS68 423 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 PLEKHJ1Q9NW61 149 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 POMT1Q9Y6A1 747 aa16.02■□□□□ 0.16
HDAC7-220ENST00000471235 C12orf77C9JDV5 145 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 ORC5O43913 435 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 GZMHP20718 246 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 TMEM50BP56557 158 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 C6orf183Q5T699 404 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 DYNAPQ8N1N2 210 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 OR10A7Q8NGE5 316 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 OR4P4Q8NGL7 312 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 LGALS14Q8TCE9 139 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 ARL11Q969Q4 196 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 ARHGAP5-AS1Q96IT6 56 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 MBNL3Q9NUK0 354 aaKnown RBP16.01■□□□□ 0.15
HDAC7-220ENST00000471235 HSF4Q9ULV5 492 aa16.01■□□□□ 0.15
HDAC7-220ENST00000471235 IGLV1-47P01700 117 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 SNRPBP14678 240 aaKnown RBP16■□□□□ 0.15
HDAC7-220ENST00000471235 RCC1P18754 421 aaPredicted RBP16■□□□□ 0.15
HDAC7-220ENST00000471235 MOGAT2Q3SYC2 334 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 PLAC9Q5JTB6 97 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 TRAT1Q6PIZ9 186 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 Q6ZPA2 131 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 LEAP2Q969E1 77 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 PTX4Q96A99 478 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 PECRQ9BY49 303 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 CHIAQ9BZP6 476 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 MEGF9Q9H1U4 602 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 AK3Q9UIJ7 227 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 COL6A5A8TX70 2615 aa16■□□□□ 0.15
HDAC7-220ENST00000471235 F2RL2O00254 374 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 NAPSAO96009 420 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 ALDH3B2P48448 385 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 HLA-DRB5Q30154 266 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 MINOS1Q5TGZ0 78 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 SLC16A12Q6ZSM3 486 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 NDNFQ8TB73 568 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 ZNF596Q8TC21 504 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 HDHD3Q9BSH5 251 aaPredicted RBP15.99■□□□□ 0.15
HDAC7-220ENST00000471235 DPAGT1Q9H3H5 408 aa15.99■□□□□ 0.15
HDAC7-220ENST00000471235 MINOS1-NBL1R4GNA1 71 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms