RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 JPT1Q9UK76 154 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF780BQ9Y6R6 833 aa3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 BRCA1P38398 1863 aaKnown RBP3.38□□□□□ -1.87
PRPF40A-206ENST00000471167 PIK3C2GO75747 1445 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 TRAV8-6A0A0B4J262 113 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 TRAV39A0A0B4J263 110 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 EEF1E1-BLOC1S5C9J1V9 151 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 D6RAR5 112 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 FAAHO00519 579 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 SLC17A2O00624 439 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 AGPAT2O15120 278 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 HMGB3O15347 200 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 DLEU1O43261 78 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 EEF1E1O43324 174 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 PFDN1O60925 122 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 ARL6IP5O75915 188 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 C6orf47O95873 294 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 TTRP02766 147 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 FBP1P09467 338 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR56A5P0C7T3 313 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 CT45A10P0DMU9 189 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 ERGP11308 486 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 NUDT1P36639 197 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 MDH2P40926 338 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 VDAC2P45880 294 aaPredicted RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 RPL34P49207 117 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 NDUFA8P51970 172 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 HSPE1P61604 102 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 RPS23P62266 143 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 SELENOTP62341 195 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 LAMTOR4Q0VGL1 99 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 C1DQ13901 141 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 SLC10A1Q14973 349 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF630Q2M218 657 aaPredicted RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 HENMT1Q5T8I9 393 aaKnown RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 SPATA31B1PQ5VZV4 182 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF620Q6ZNG0 422 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 TMPPEQ6ZT21 453 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 SLC22A18ASQ8N1D0 253 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 UBAC2Q8NBM4 344 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 BEST4Q8NFU0 473 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR4M1Q8NGD0 313 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR10AD1Q8NGE0 317 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR9Q1Q8NGQ5 310 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR1N2Q8NGR9 330 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 FAM3DQ96BQ1 224 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 ACY3Q96HD9 319 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR52B2Q96RD2 323 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 OR52E6Q96RD3 313 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 PLEKHF1Q96S99 279 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 CDX2Q99626 313 aaPredicted RBP3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 EBF4Q9BQW3 602 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 C1orf50Q9BV19 199 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 ULBP3Q9BZM4 244 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 CHST5Q9GZS9 411 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 PDFQ9HBH1 243 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 PLSCR3Q9NRY6 295 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 NEU3Q9UQ49 428 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 WSB1Q9Y6I7 421 aa3.37□□□□□ -1.87
PRPF40A-206ENST00000471167 SETD5Q9C0A6 1442 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF518AQ6AHZ1 1483 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 A0A1B0GXF2 115 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 A0A1W2PRE2 83 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 C5orf58C9J3I9 102 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 H0Y9J4 135 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 NDUFS5O43920 106 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 CCDC22O60826 627 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 SPAG7O75391 227 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 PFN1P07737 140 aaKnown RBP3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 OR4A8P0C604 315 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 BTCP35070 178 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 CDKN2BP42772 138 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 H2BFSP57053 126 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 CXCL6P80162 114 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 GTF2BQ00403 316 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 INCA1Q0VD86 236 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 IHHQ14623 411 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 FAM162BQ5T6X4 162 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 NANOGP8Q6NSW7 305 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 LPCAT3Q6P1A2 487 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 ALKAL1Q6UXT8 129 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 DNM1P46Q6ZS02 220 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 FAM71E2Q8N5Q1 922 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 GPR26Q8NDV2 337 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 OR10J6PQ8NGY7 276 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 OR9G1Q8NH87 305 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 OR1S1Q8NH92 325 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 TCEAL3Q969E4 200 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 DCPSQ96C86 337 aaKnown RBP3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 AURKBQ96GD4 344 aaPredicted RBP3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 DNAJC30Q96LL9 226 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 EFCAB11Q9BUY7 163 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 NANOGQ9H9S0 305 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 C14orf105Q9NVL8 296 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 PSG8Q9UQ74 426 aa3.36□□□□□ -1.87
PRPF40A-206ENST00000471167 YTHDF2Q9Y5A9 579 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms