RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 SMPD3Q9NY59 655 aaPredicted RBP11.7□□□□□ -0.54
SDCCAG3-209ENST00000468963 DIMT1Q9UNQ2 313 aaKnown RBP11.7□□□□□ -0.54
SDCCAG3-209ENST00000468963 A0A1W2PP11 408 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 TMEM30CPA0ZSE6 113 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 LINC01548A6NM66 108 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 ORC5O43913 435 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 DUS4LO95620 317 aaKnown RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 BAG2O95816 211 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 CLIC3O95833 236 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 MPIG6BO95866 241 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGKV1D-33P01593 117 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGKV1-33P01594 117 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGHG2P01859 326 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 CSTBP04080 98 aaKnown RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 GAPDHP04406 335 aaKnown RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 PPP3R1P63098 170 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 HES1Q14469 280 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 ETV3LQ6ZN32 361 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 C8orf31Q8N9H6 132 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 OR10X1Q8NGY0 326 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 CHPT1Q8WUD6 406 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 ST6GALNAC6Q969X2 333 aa11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 NOL4LQ96MY1 436 aaPredicted RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 PAK1IP1Q9NWT1 392 aaPredicted RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGHV1-3A0A0C4DH29 117 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 IRGMA1A4Y4 181 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 HSD17B6O14756 317 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 ZNF780AO75290 641 aaPredicted RBP11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 SERPINA2P20848 420 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 THBS3P49746 956 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 RPL23AP62750 156 aaKnown RBP11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 EGFEM1PQ0D2K5 195 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 KHDC1LQ5JSQ8 128 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 ATAD3CQ5T2N8 411 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 ZNF497Q6ZNH5 498 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 MOB3BQ86TA1 216 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 MRPL41Q8IXM3 137 aaKnown RBP11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 Q8N6K4 173 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 CCDC107Q8WV48 283 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 TMEM80Q96HE8 168 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 EAF1Q96JC9 268 aaPredicted RBP11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 ZNF184Q99676 751 aaPredicted RBP11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 GFOD1Q9NXC2 390 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 LINC00527Q9UJ94 153 aa11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 KMT2CQ8NEZ4 4911 aaKnown RBP11.68□□□□□ -0.54
SDCCAG3-209ENST00000468963 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 TRAV8-7A0A075B6U6 113 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 MAGEA13PA6NCF6 341 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 CCRL2O00421 344 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 GTF2F2P13984 249 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 RIPK1Q13546 671 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 Q499Y3 187 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 SLC22A6Q4U2R8 563 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 C18orf65Q6ZTR6 163 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 OR2W3Q7Z3T1 314 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 LYPD6Q86Y78 171 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 TMEM104Q8NE00 496 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 GGHQ92820 318 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 PGLYRP3Q96LB9 341 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 S100A13Q99584 98 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 PLSCR3Q9NRY6 295 aa11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 RCC2Q9P258 522 aaKnown RBP11.67□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGHV3-72A0A0B4J1Y9 119 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 SERPINE3A8MV23 424 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 SDCBPO00560 298 aaPredicted RBP11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 MYL12AP19105 171 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 REG1BP48304 166 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 ADARB1P78563 741 aaKnown RBP11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 GPR176Q14439 515 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 Q3ZCU0 254 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 YIF1BQ5BJH7 314 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 TTC23Q5W5X9 447 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 SLC35E3Q7Z769 313 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 TGIF2LXQ8IUE1 241 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 IZUMO1Q8IYV9 350 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 GAPTQ8N292 157 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 COMMD1Q8N668 190 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 ZFP41Q8N8Y5 198 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 Q8N9W7 124 aa11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 MRPS24Q96EL2 167 aaKnown RBP11.66□□□□□ -0.54
SDCCAG3-209ENST00000468963 TENM3Q9P273 2699 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGHV3-43A0A0B4J1X8 118 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 EBAG9O00559 213 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 IGHV3-43DP0DP04 118 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 FSTP19883 344 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 CD1BP29016 333 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 SLC6A1P30531 599 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 MYCNOSP40205 109 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 VHLP40337 213 aa11.65□□□□□ -0.54
SDCCAG3-209ENST00000468963 ZNF134P52741 427 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms