RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PHB2Q99623 299 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 CABLES2Q9BTV7 478 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 CHIAQ9BZP6 476 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 TAF9BQ9HBM6 251 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 DCAF16Q9NXF7 216 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 SPTBN1Q01082 2364 aaKnown RBP15.87■□□□□ 0.13
SMC4-209ENST00000468653 DYSFO75923 2080 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 RELNP78509 3460 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 OOEPA6NGQ2 149 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 SMLR1H3BR10 107 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 SLC22A5O76082 557 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 DUS4LO95620 317 aaKnown RBP15.87■□□□□ 0.13
SMC4-209ENST00000468653 MUC1P15941 1255 aaPredicted RBP15.87■□□□□ 0.13
SMC4-209ENST00000468653 UCP3P55916 312 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 EDDM3AQ14507 147 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 ABCA11PQ4W5N1 156 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 NOXA1Q86UR1 476 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 MITD1Q8WV92 249 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 CCL17Q92583 94 aa15.87■□□□□ 0.13
SMC4-209ENST00000468653 MGST3O14880 152 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 SFT2D2O95562 160 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 GLIPR1P48060 266 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 HMGN3Q15651 99 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 C2orf68Q2NKX9 166 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 STUMQ69YW2 141 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 NLRC3Q7RTR2 1065 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 SLC38A6Q8IZM9 456 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 ZNF561Q8N587 486 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 ZNRF1Q8ND25 227 aa15.86■□□□□ 0.13
SMC4-209ENST00000468653 VRK1Q99986 396 aaPredicted RBP15.86■□□□□ 0.13
SMC4-209ENST00000468653 TRBV6-7A0A0A0MS04 114 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 K7N7A8 449 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 GYPAP02724 150 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 C1QBP02746 253 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 SLC9A3R2Q15599 337 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 TEX36Q5VZQ5 186 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 LPCAT3Q6P1A2 487 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 CLEC18BQ6UXF7 455 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 TPRX1Q8N7U7 411 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 UBALD1Q8TB05 177 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 DLL4Q9NR61 685 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 TMEM106BQ9NUM4 274 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 MAB21L2Q9Y586 359 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 TEX13DA0A0J9YY54 714 aaPredicted RBP15.85■□□□□ 0.13
SMC4-209ENST00000468653 TMEM178BH3BS89 294 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 LGALS8O00214 317 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 HSPA12AO43301 675 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 TUSC2O75896 110 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 SIX6O95475 246 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 PIGPP57054 158 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 PAX5Q02548 391 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 C6orf183Q5T699 404 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 LIN54Q6MZP7 749 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 KCTD9Q7L273 389 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 SGPP2Q8IWX5 399 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 ZNF565Q8N9K5 539 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 OR5D13Q8NGL4 314 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 MRGPRDQ8TDS7 321 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 SDSLQ96GA7 329 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 ZNF665Q9H7R5 613 aa15.85■□□□□ 0.13
SMC4-209ENST00000468653 TRAV38-1A0A0B4J264 116 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 C19orf84I3L1E1 186 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 GIPP09681 153 aaPredicted RBP15.84■□□□□ 0.13
SMC4-209ENST00000468653 SUPT4H1P63272 117 aaKnown RBP15.84■□□□□ 0.13
SMC4-209ENST00000468653 PHLDA2Q53GA4 152 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 H1FOOQ8IZA3 346 aaPredicted RBP15.84■□□□□ 0.13
SMC4-209ENST00000468653 SECTM1Q8WVN6 248 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 GALMQ96C23 342 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 CCL13Q99616 98 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 RSRP1Q9BUV0 290 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 DNTTIP1Q9H147 329 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 OR1A1Q9P1Q5 309 aa15.84■□□□□ 0.13
SMC4-209ENST00000468653 CFAP46Q8IYW2 2715 aa15.83■□□□□ 0.13
SMC4-209ENST00000468653 PPIAL4EA0A075B759 164 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 IGHV1-69-2A0A0G2JMI3 117 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 C12orf77C9JDV5 145 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 NPIPB11E5RHQ5 1161 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 PPIAL4DF5H284 164 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 PPIAL4FP0DN26 164 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 IL2RGP31785 369 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 ZNF843Q8N446 348 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 COQ8AQ8NI60 647 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 ZNF486Q96H40 463 aaPredicted RBP15.83■□□□□ 0.12
SMC4-209ENST00000468653 LURAP1Q96LR2 239 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 GAFA1Q96PS6 74 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 SLC5A7Q9GZV3 580 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 OR2W1Q9Y3N9 320 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 PPIAL4AQ9Y536 164 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 ARFGEF3Q5TH69 2177 aa15.83■□□□□ 0.12
SMC4-209ENST00000468653 CRYM-AS1A6NIL9 109 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 NKX6-3A6NJ46 265 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 OR2A4O95047 310 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 IFNA2P01563 188 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 RPS2P15880 293 aaKnown RBP15.82■□□□□ 0.12
SMC4-209ENST00000468653 PPOXP50336 477 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 EDDM3BP56851 147 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 RAP2BP61225 183 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 TRAT1Q6PIZ9 186 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 CCDC71LQ8N9Z2 235 aa15.82■□□□□ 0.12
SMC4-209ENST00000468653 OR13A1Q8NGR1 328 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms