RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ASB17Q8WXJ9 295 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 TM6SF2Q9BZW4 377 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 WASHC3Q9Y3C0 194 aa-0.36□□□□□ -2.47
SSB-208ENST00000468600 ADAMTSL1Q8N6G6 1762 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 IGHV3-73A0A0B4J1V6 119 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 C2orf74A8MZ97 194 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 GNRH2O43555 120 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 PRKACAP17612 351 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 CD9P21926 228 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 CD200P41217 278 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 AKR1C2P52895 323 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 OR2W3Q7Z3T1 314 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 GLT6D1Q7Z4J2 308 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 CASTOR1Q8WTX7 329 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 CCDC77Q9BR77 488 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 C8orf4Q9NR00 106 aa-0.37□□□□□ -2.47
SSB-208ENST00000468600 MEIKINA0A087WXM9 373 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 C11orf86A6NJI1 115 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 CPLX1O14810 134 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 GATCO43716 136 aaKnown RBP-0.38□□□□□ -2.47
SSB-208ENST00000468600 LTAP01374 205 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 RPL14P50914 215 aaKnown RBP-0.38□□□□□ -2.47
SSB-208ENST00000468600 PLTPP55058 493 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 TAS2R60P59551 318 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 HMGN5P82970 282 aaKnown RBP-0.38□□□□□ -2.47
SSB-208ENST00000468600 GAPTQ8N292 157 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 NAT6Q93015 286 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 NAP1L5Q96NT1 182 aaPredicted RBP-0.38□□□□□ -2.47
SSB-208ENST00000468600 ANP32EQ9BTT0 268 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 FAM192AQ9GZU8 254 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 MYOFQ9NZM1 2061 aa-0.38□□□□□ -2.47
SSB-208ENST00000468600 TMSB15BA0A087X1C1 80 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 TMEM235A6NFC5 223 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 LY6HO94772 140 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 CA2P00918 260 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 CTSEP14091 401 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 AKR1C3P42330 323 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 SLC35B1P78383 322 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 CDK5R1Q15078 307 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 CMTM8Q8IZV2 173 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 PIH1D2Q8WWB5 315 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 C1QTNF6Q9BXI9 259 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 CLSTN2Q9H4D0 955 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 ATAD5Q96QE3 1844 aa-0.39□□□□□ -2.47
SSB-208ENST00000468600 COL7A1Q02388 2944 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 LAMA4Q16363 1823 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 FRAS1Q86XX4 4008 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 NCOA6Q14686 2063 aaPredicted RBP-0.4□□□□□ -2.47
SSB-208ENST00000468600 RBFOX3A6NFN3 312 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 ZNF593O00488 134 aaPredicted RBP-0.4□□□□□ -2.47
SSB-208ENST00000468600 ZW10O43264 779 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 RPL31P62899 125 aaKnown RBP-0.4□□□□□ -2.47
SSB-208ENST00000468600 SLC38A11Q08AI6 406 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 ACTBL2Q562R1 376 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 PABPC1L2AQ5JQF8 200 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 LRRC28Q86X40 367 aaPredicted RBP-0.4□□□□□ -2.47
SSB-208ENST00000468600 MICU2Q8IYU8 434 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 OR11H1Q8NG94 326 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 OR51A7Q8NH64 312 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 OR10A6Q8NH74 314 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 TBX5Q99593 518 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 ADAT1Q9BUB4 502 aaKnown RBP-0.4□□□□□ -2.47
SSB-208ENST00000468600 SLC25A31Q9H0C2 315 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 AUNIPQ9H7T9 357 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 KIAA2026Q5HYC2 2103 aa-0.4□□□□□ -2.47
SSB-208ENST00000468600 BAZ2BQ9UIF8 2168 aaKnown RBP-0.4□□□□□ -2.47
SSB-208ENST00000468600 A0A1W2PRF3 423 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 A0A1W2PRM7 423 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 H3BP45 60 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 UBFD1O14562 309 aaKnown RBP-0.41□□□□□ -2.48
SSB-208ENST00000468600 ZNF737O75373 536 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 SURF2Q15527 256 aaPredicted RBP-0.41□□□□□ -2.48
SSB-208ENST00000468600 MRPL51Q4U2R6 128 aaKnown RBP-0.41□□□□□ -2.48
SSB-208ENST00000468600 FP248Q71RG6 208 aaPredicted RBP-0.41□□□□□ -2.48
SSB-208ENST00000468600 CA13Q8N1Q1 262 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 FAM19A2Q8N3H0 131 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 OR51Q1Q8NH59 317 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 MND1Q9BWT6 205 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 POMPQ9Y244 141 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 MYH11P35749 1972 aa-0.41□□□□□ -2.48
SSB-208ENST00000468600 ADAMTSL3P82987 1691 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 PCDH15Q96QU1 1955 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.42□□□□□ -2.48
SSB-208ENST00000468600 TRAV41A0A0B4J266 112 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 NPPAP01160 153 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 GABRR2P28476 465 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 TMEM42Q69YG0 159 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 BPIFA3Q9BQP9 254 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 NMRK1Q9NWW6 199 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 DNAJC27Q9NZQ0 273 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 FAM215AQ9Y5M1 114 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 NAV3Q8IVL0 2385 aa-0.42□□□□□ -2.48
SSB-208ENST00000468600 ZFC3H1O60293 1989 aaKnown RBP-0.43□□□□□ -2.48
SSB-208ENST00000468600 SCN9AQ15858 1988 aa-0.43□□□□□ -2.48
SSB-208ENST00000468600 ARFGEF3Q5TH69 2177 aa-0.43□□□□□ -2.48
SSB-208ENST00000468600 LOC100653049A0A140TA62 436 aa-0.43□□□□□ -2.48
SSB-208ENST00000468600 J3QLI3 93 aa-0.43□□□□□ -2.48
SSB-208ENST00000468600 KRT34O76011 436 aa-0.43□□□□□ -2.48
SSB-208ENST00000468600 SLC2A1P11166 492 aa-0.43□□□□□ -2.48
SSB-208ENST00000468600 KRTAP6-1Q3LI64 71 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms