RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 RAB9BQ9NP90 201 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 DSCAML1Q8TD84 2053 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 TMEM89A2RUT3 159 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 NOTOA8MTQ0 251 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 GLP1RP43220 463 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 PRRX1P54821 245 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 PRAMEF5Q5TYX0 476 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 TRAT1Q6PIZ9 186 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 ZNF554Q86TJ5 538 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-206ENST00000468253 OR52M1Q8NGK5 317 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 ZNF596Q8TC21 504 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 MRGPRDQ8TDS7 321 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 PTX4Q96A99 478 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 CREB3L1Q96BA8 519 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 KIRREL1Q96J84 757 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 IDI2-AS1Q9NZ38 188 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 HSF4Q9ULV5 492 aa16.25■□□□□ 0.19
NPHP4-206ENST00000468253 POM121CA8CG34 1229 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 IGLV1-47P01700 117 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 GADD45AP24522 165 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 BLVRBP30043 206 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-206ENST00000468253 COMPP49747 757 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-206ENST00000468253 OR10A3P58181 314 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 DYNC1I2Q13409 638 aaKnown RBP16.24■□□□□ 0.19
NPHP4-206ENST00000468253 HES5Q5TA89 166 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 C17orf50Q8WW18 174 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 DYRK2Q92630 601 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 YIPF6Q96EC8 236 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 DUX5Q96PT3 197 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 CHCHD6Q9BRQ6 235 aa16.24■□□□□ 0.19
NPHP4-206ENST00000468253 RIMS4Q9H426 269 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-206ENST00000468253 UBE2QL1A1L167 161 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 C15orf65H3BRN8 121 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 TMEM127O75204 238 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 IGHV4-59P01825 116 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 HKR1P10072 659 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 RAB6AP20340 208 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 OMGP23515 440 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 HTR1DP28221 377 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 GDNFP39905 211 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 CLDN12P56749 244 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 TMEM30BQ3MIR4 351 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 C6orf183Q5T699 404 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 NR2C2APQ86WQ0 139 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 OR56B1Q8NGI3 324 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 GCDHQ92947 438 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-206ENST00000468253 ARL11Q969Q4 196 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 FAAP24Q9BTP7 215 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 MBNL3Q9NUK0 354 aaKnown RBP16.23■□□□□ 0.19
NPHP4-206ENST00000468253 PLEKHJ1Q9NW61 149 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 DPM3Q9P2X0 92 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 TRAPPC2LQ9UL33 140 aa16.23■□□□□ 0.19
NPHP4-206ENST00000468253 A0A0A6YYD4 124 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 TMEM272A0A1B0GTI8 110 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 BTBD17A6NE02 478 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 FOXI3A8MTJ6 420 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-206ENST00000468253 TOR1AO14656 332 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 SDC2P34741 201 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 DYNLT3P51808 116 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 TMEM50BP56557 158 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 Q3ZCU0 254 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 LHFPL4Q7Z7J7 247 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 OR9G1Q8NH87 305 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 RFESDQ8TAC1 157 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 CCDC107Q8WV48 283 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 SSX3Q99909 188 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 SULT4A1Q9BR01 284 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 NICN1Q9BSH3 213 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 CHIAQ9BZP6 476 aa16.22■□□□□ 0.19
NPHP4-206ENST00000468253 TRAV39A0A0B4J263 110 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 LOC100506127A0A0U1RQW1 187 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 F2RL2O00254 374 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 SOCS1O15524 211 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 SPINT2O43291 252 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 LRRC75BQ2VPJ9 315 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 NKAPLQ5M9Q1 402 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 LDLRAD2Q5SZI1 272 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 BAIAP2L2Q6UXY1 529 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 Q6ZTK2 550 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 C6orf201Q7Z4U5 140 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 C8orf31Q8N9H6 132 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 OR4P4Q8NGL7 312 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 KCNK15Q9H427 330 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 LIN7BQ9HAP6 207 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 ZNF286AQ9HBT8 521 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 KCNIP1Q9NZI2 227 aa16.21■□□□□ 0.19
NPHP4-206ENST00000468253 TRBV6-6A0A0A6YYG2 114 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 METTL21EPA6NDL7 271 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 FAM181BA6NEQ2 426 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 LEUTXA8MZ59 168 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 NFYBP25208 207 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 SSTR5P35346 364 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 ACTG1P63261 375 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 FOXL1Q12952 345 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 OR4K15Q8NH41 348 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 MRPL30Q8TCC3 161 aaKnown RBP16.2■□□□□ 0.18
NPHP4-206ENST00000468253 CENPOQ9BU64 300 aa16.2■□□□□ 0.18
NPHP4-206ENST00000468253 VPREB3Q9UKI3 123 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms