RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 LY6LH3BQJ8 138 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 GTF2F2P13984 249 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 FSTP19883 344 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 RPS11P62280 158 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL7A1-207ENST00000467985 RBM39Q14498 530 aaKnown RBP15.29■□□□□ 0.04
COL7A1-207ENST00000467985 MPV17LQ2QL34 196 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 LIPKQ5VXJ0 399 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 CDH26Q8IXH8 852 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 OR13C5Q8NGS8 318 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 THRSPQ92748 146 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 PGLYRP3Q96LB9 341 aa15.29■□□□□ 0.04
COL7A1-207ENST00000467985 NPIPB11E5RHQ5 1161 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 OR2F2O95006 317 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 OPN1MWP04001 364 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 CD1AP06126 327 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 OPN1MW2P0DN77 364 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 OPN1MW3P0DN78 364 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 GZMHP20718 246 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 SERPINA2P20848 420 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 PLPPR1Q8TBJ4 325 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 WIPF2Q8TF74 440 aaPredicted RBP15.28■□□□□ 0.04
COL7A1-207ENST00000467985 RBM14Q96PK6 669 aaKnown RBP15.28■□□□□ 0.04
COL7A1-207ENST00000467985 TMED9Q9BVK6 235 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 SPACA1Q9HBV2 294 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 SCOCQ9UIL1 159 aa15.28■□□□□ 0.04
COL7A1-207ENST00000467985 TRBV5-7A0A0A0MS05 114 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 TMEM30CPA0ZSE6 113 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 J3QR06 171 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 M0QZK8 103 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 GEMIN2O14893 280 aaKnown RBP15.27■□□□□ 0.04
COL7A1-207ENST00000467985 FAM106CPP0CH98 169 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 SMIM18P0DKX4 95 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 CPEP16870 476 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 CD24P25063 80 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 SLC22A6Q4U2R8 563 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 NDUFA11Q86Y39 141 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 MRGPRDQ8TDS7 321 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 TOMM40LQ969M1 308 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 MUL1Q969V5 352 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 RPEQ96AT9 228 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 ORAI1Q96D31 301 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 MRPS24Q96EL2 167 aaKnown RBP15.27■□□□□ 0.04
COL7A1-207ENST00000467985 OR14A2Q96R54 314 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 SLC25A33Q9BSK2 321 aa15.27■□□□□ 0.04
COL7A1-207ENST00000467985 TRAV8-7A0A075B6U6 113 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 CCRL2O00421 344 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 CD28P10747 220 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 MAPK3P27361 379 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-207ENST00000467985 MADCAM1Q13477 382 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 GPR50Q13585 617 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 TPBGQ13641 420 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 DOC2BQ14184 412 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 ATAD3CQ5T2N8 411 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 Q6ZS46 218 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 JAGN1Q8N5M9 183 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 OCSTAMPQ9BR26 566 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 PSG11Q9UQ72 335 aa15.26■□□□□ 0.03
COL7A1-207ENST00000467985 MRPS28Q9Y2Q9 187 aaKnown RBP15.26■□□□□ 0.03
COL7A1-207ENST00000467985 PSMA1P25786 263 aaKnown RBP15.25■□□□□ 0.03
COL7A1-207ENST00000467985 SSTR5P35346 364 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 TRAM1Q15629 374 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 NSUN5P1Q3KNT7 163 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 THNSL2Q86YJ6 484 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 MS4A15Q8N5U1 240 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 OR4F17Q8NGA8 305 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 RFESDQ8TAC1 157 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 TMEM203Q969S6 136 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 DERL3Q96Q80 235 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 OR4F4Q96R69 305 aa15.25■□□□□ 0.03
COL7A1-207ENST00000467985 PRKDCP78527 4128 aaKnown RBP15.24■□□□□ 0.03
COL7A1-207ENST00000467985 TRIM64CA6NLI5 447 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 RAB7AP51149 207 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 LTC4SQ16873 150 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 UTF1Q5T230 341 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 SYT6Q5T7P8 510 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-207ENST00000467985 GLIPR1L1Q6UWM5 242 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 ZNF497Q6ZNH5 498 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 OR8H3Q8N146 312 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 NKAIN3Q8N8D7 197 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 OR52M1Q8NGK5 317 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 OR10X1Q8NGY0 326 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 NEK7Q8TDX7 302 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 LEAP2Q969E1 77 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 CITED2Q99967 270 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-207ENST00000467985 RAB9BQ9NP90 201 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 ZNF581Q9P0T4 197 aa15.24■□□□□ 0.03
COL7A1-207ENST00000467985 A0A1W2PPK0 400 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A10PA6NDY2 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A18PA6NE21 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A16PA6NEW6 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A20PA6NIJ5 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A7PA6NKC0 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A9PA6NNJ1 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A12PA8MX19 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A5PA8MXJ8 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A23PA8MXZ1 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 MCRIP1C9JLW8 97 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 ORC5O43913 435 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A15PP0C7V4 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A13PP0C7W8 464 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms