RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RAB12Q6IQ22 244 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 RTN4RL2Q86UN3 420 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 SVOPQ8N4V2 548 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 YTHDF1Q9BYJ9 559 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 NPFFR1Q9GZQ6 430 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 CST11Q9H112 138 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 SPACA1Q9HBV2 294 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 IDI2-AS1Q9NZ38 188 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 AK6Q9Y3D8 172 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 LRRC42Q9Y546 428 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
CCHCR1-211ENST00000467553 UBE2QL1A1L167 161 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 MRPS14O60783 128 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 TSPAN15O95858 294 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 MT-ND4P03905 459 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 UBBP0CG47 229 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 JUNBP17275 347 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 GZMHP20718 246 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 FUT3P21217 361 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 HTR2CP28335 458 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 UTF1Q5T230 341 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 SPARTQ8N0X7 666 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM110DQ8TAY7 271 aaPredicted RBP11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 ZNF596Q8TC21 504 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 CFHR4Q92496 578 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 LEAP2Q969E1 77 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 KIRREL1Q96J84 757 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 Q96M66 194 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 PLGRKTQ9HBL7 147 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 ETAA1Q9NY74 926 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 H3BUI4 141 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 IL1AP01583 271 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 OPN1MWP04001 364 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 OPN1MW2P0DN77 364 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 OPN1MW3P0DN78 364 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 VSIG8P0DPA2 414 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 SSTR5P35346 364 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 PAX5Q02548 391 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 P2RY14Q15391 338 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 SSX1Q16384 188 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 OR4P4Q8NGL7 312 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 UBALD1Q8TB05 177 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 ARL11Q969Q4 196 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 GFI1Q99684 422 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 RCC2Q9P258 522 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 TRAPPC2LQ9UL33 140 aa11.32□□□□□ -0.6
CCHCR1-211ENST00000467553 LEUTXA8MZ59 168 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 NPIPB11E5RHQ5 1161 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 AIPO00170 330 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 SLC22A1O15245 554 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 IGLV1-47P01700 117 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 CD37P11049 281 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 PSMB9P28065 219 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 CD34P28906 385 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 OR6M1Q8NGM8 313 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 OR4K15Q8NH41 348 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 KCNG3Q8TAE7 436 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 NEDD4LQ96PU5 975 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 TMEM59Q9BXS4 323 aa11.31□□□□□ -0.6
CCHCR1-211ENST00000467553 A0A087X0M5 115 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 A0A1B0GX30 115 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 SLC17A2O00624 439 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 PDCD6O75340 191 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 ARSBP15848 533 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 GNG10P50151 68 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 DYNLT3P51808 116 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 RPS27AP62979 156 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 HLA-DRB5Q30154 266 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 UBE2UQ5VVX9 321 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 CCBE1Q6UXH8 406 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 Q8N2B8 174 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
CCHCR1-211ENST00000467553 CYYR1Q96J86 154 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms