RNA–Protein interactions for RNA: ENST00000466884.1

COL2A1-204, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 478 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-204ENST00000466884 APOL4Q9BPW4 351 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 DGCR6LQ9BY27 220 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 BARHL1Q9BZE3 327 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 PARP11Q9NR21 331 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 ABCD2Q9UBJ2 740 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 ERGIC3Q9Y282 383 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 R4GMQ9 66 aa6.24□□□□□ -1.41
COL2A1-204ENST00000466884 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 PRR32B1ATL7 298 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 NPIPB11E5RHQ5 1161 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 SLC33A1O00400 549 aaPredicted RBP6.23□□□□□ -1.41
COL2A1-204ENST00000466884 ATP6V0E1O15342 81 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 MAGEB4O15481 346 aaPredicted RBP6.23□□□□□ -1.41
COL2A1-204ENST00000466884 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
COL2A1-204ENST00000466884 RGS11O94810 467 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 HMGN1P05114 100 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 IL3RAP26951 378 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 RAB40BQ12829 278 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 PDZK1IP1Q13113 114 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 APOFQ13790 326 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 GINS1Q14691 196 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 MICAQ29983 383 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 Q6P435 159 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 CEMP1Q6PRD7 247 aaPredicted RBP6.23□□□□□ -1.41
COL2A1-204ENST00000466884 LINC00322Q6ZN03 302 aaPredicted RBP6.23□□□□□ -1.41
COL2A1-204ENST00000466884 PLEKHG7Q6ZR37 379 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 MINDY2Q8NBR6 621 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 CHST4Q8NCG5 386 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 TMEM104Q8NE00 496 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 DNAAF1Q8NEP3 725 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 BBS1Q8NFJ9 593 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 OR51T1Q8NGJ9 327 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 MRGPRDQ8TDS7 321 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 NSMCE2Q96MF7 247 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 MBOAT4Q96T53 435 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 COMMD4Q9H0A8 199 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 LINC00574Q9H8X3 128 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 SLC25A19Q9HC21 320 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 FAM53CQ9NYF3 392 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 KIF25Q9UIL4 384 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 MAGEL2Q9UJ55 1249 aa6.23□□□□□ -1.41
COL2A1-204ENST00000466884 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
COL2A1-204ENST00000466884 A0A1W2PN81 502 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 HSPB6O14558 160 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 TPPPO94811 219 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 RPP14O95059 124 aaKnown RBP6.22□□□□□ -1.41
COL2A1-204ENST00000466884 IGHV3-11P01762 117 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 CCL1P22362 96 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 PRKACBP22694 351 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 CHRNA7P36544 502 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 MAGEA2P43356 314 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 MMDQ15546 238 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 LCN12Q6JVE5 192 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 ZNF322Q6U7Q0 402 aaPredicted RBP6.22□□□□□ -1.41
COL2A1-204ENST00000466884 CD300LDQ6UXZ3 194 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 RDH10Q8IZV5 341 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 CCDC54Q8NEL0 328 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 CASTOR1Q8WTX7 329 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 RGP1Q92546 391 aaPredicted RBP6.22□□□□□ -1.41
COL2A1-204ENST00000466884 RFT1Q96AA3 541 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 NIPSNAP1Q9BPW8 284 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 CHST5Q9GZS9 411 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 NCOR1P1Q9H4R4 102 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 PLEKHA3Q9HB20 300 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 SPAG4Q9NPE6 437 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 FAM118AQ9NWS6 357 aa6.22□□□□□ -1.41
COL2A1-204ENST00000466884 IGKV1-12A0A0C4DH73 117 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 TXNL1O43396 289 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 KDM4BO94953 1096 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 IGKV1D-12P01611 117 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 HLA-DRB1P01911 266 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 OCM2P0CE71 109 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 OCMP0CE72 109 aaPredicted RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 MED14OSP0DP75 135 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 SLC2A5P22732 501 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 CD40LGP29965 261 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 BLVRBP30043 206 aaPredicted RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 SSTR5P35346 364 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 CXCR4P61073 352 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 ECSCRQ19T08 205 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 PAN3Q58A45 887 aaKnown RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 LGALS9CQ6DKI2 356 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 LIN54Q6MZP7 749 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 FAHD1Q6P587 224 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 LINC00311Q8N616 119 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 PP6455Q8WZ26 134 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 C10orf35Q96D05 121 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 MS4A10Q96PG2 267 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 NR1H4Q96RI1 486 aaPredicted RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 THAP7Q9BT49 309 aaPredicted RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 REEP1Q9H902 201 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 RHOFQ9HBH0 211 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 NEK6Q9HC98 313 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 RANGRFQ9HD47 186 aaPredicted RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 ETAA1Q9NY74 926 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 FOXA2Q9Y261 457 aaPredicted RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 SAMHD1Q9Y3Z3 626 aaKnown RBP6.21□□□□□ -1.42
COL2A1-204ENST00000466884 U3KQE9 123 aa6.21□□□□□ -1.42
COL2A1-204ENST00000466884 IGHV7-81A0A0B4J1V7 117 aa6.2□□□□□ -1.42
COL2A1-204ENST00000466884 TRAV39A0A0B4J263 110 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms