RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 PHLPP1O60346 1717 aa2.64□□□□□ -1.99
VPS13D-203ENST00000466732 SCN11AQ9UI33 1791 aa2.64□□□□□ -1.99
VPS13D-203ENST00000466732 RLFQ13129 1914 aa2.64□□□□□ -1.99
VPS13D-203ENST00000466732 TDRD6O60522 2096 aaKnown RBP2.64□□□□□ -1.99
VPS13D-203ENST00000466732 ADAMTSL3P82987 1691 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TULP4Q9NRJ4 1543 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 COL1A2P08123 1366 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ATRXP46100 2492 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF106Q9H2Y7 1883 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 DOCK5Q9H7D0 1870 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 RGPD1P0DJD0 1748 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ERCC6L2Q5T890 1561 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 C10orf71Q711Q0 1435 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 WI2-2373I1.2A0A1W2PRP0 233 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TCRBV3S1A0A5B6 114 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PRSS37A4D1T9 235 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 SMIM9A6NGZ8 99 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ARL5CA6NH57 179 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF705EA8MWA4 302 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 OR7A17O14581 309 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 RS1O15537 224 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 RBFOX2O43251 390 aaKnown RBP eCLIP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 RDH16O75452 317 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 SIX6O95475 246 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 SLC2A10O95528 541 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ETHE1O95571 254 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PRB2P02812 416 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 MT-ND4P03905 459 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 UBBP0CG47 229 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 GZMBP10144 247 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FCARP24071 287 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 MMP11P24347 488 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 GABRR2P28476 465 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 RPA3P35244 121 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 XCR1P46094 333 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 AKR1C2P52895 323 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 AQP5P55064 265 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 NDUFA6P56556 154 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TAS2R43P59537 309 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 UBA52P62987 128 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF85Q03923 595 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FUT7Q11130 342 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TCP10Q12799 353 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZP4Q12836 540 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PPP1R8Q12972 351 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 MLLT11Q13015 90 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 EBPQ15125 230 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 RHEBQ15382 184 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 HMGN3Q15651 99 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 LTC4SQ16873 150 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 IQCJQ1A5X6 159 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM128Q5BJH2 165 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PDZD11Q5EBL8 140 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TPTE2P1Q5T6R2 138 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FAM78BQ5VT40 261 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CST9Q5W186 159 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 DMKNQ6E0U4 476 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FAM71F2Q6NXP2 309 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PRSS54Q6PEW0 395 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 WDR74Q6RFH5 385 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TMPRSS11AQ6ZMR5 421 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF705AQ6ZN79 300 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PARGQ86W56 976 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 NIT1Q86X76 327 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 DOLPP1Q86YN1 238 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CEND1Q8N111 149 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FTMTQ8N4E7 242 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CBR4Q8N4T8 237 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 OR7G2Q8NG99 324 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 OR56A4Q8NGH8 313 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 OR9I1Q8NGQ6 314 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 OR1P1Q8NH06 330 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 OR4A16Q8NH70 328 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FAM151AQ8WW52 585 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ST8SIA1Q92185 356 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 FAM3CQ92520 227 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 GALMQ96C23 342 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CXorf40BQ96DE9 158 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 SEH1LQ96EE3 360 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PIK3IP1Q96FE7 263 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZFP3Q96NJ6 502 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 MIEN1Q9BRT3 115 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 PBDC1Q9BVG4 233 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CHRNA10Q9GZZ6 450 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TXNIPQ9H3M7 391 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CALHM2Q9HA72 323 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 BEX1Q9HBH7 125 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM27Q9HBJ8 222 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 LRTM1Q9HBL6 345 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 NOX3Q9HBY0 568 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 MRPL27Q9P0M9 148 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 DOK5Q9P104 306 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF222Q9UK12 451 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 C14orf166Q9Y224 244 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 NTNG1Q9Y2I2 539 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 AK6Q9Y3D8 172 aaKnown RBP2.63□□□□□ -1.99
VPS13D-203ENST00000466732 WDR45Q9Y484 360 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 CDH10Q9Y6N8 788 aa2.63□□□□□ -1.99
VPS13D-203ENST00000466732 ATG2AQ2TAZ0 1938 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms