RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 C3orf85A0A1B0GTC6 90 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 MDH2P40926 338 aaKnown RBP11.42□□□□□ -0.58
UBE4B-206ENST00000466379 COMMD7Q86VX2 200 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 RELL2Q8NC24 303 aaPredicted RBP11.42□□□□□ -0.58
UBE4B-206ENST00000466379 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 C18orf12Q96KH6 178 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 CXorf58Q96LI9 332 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 SUCNR1Q9BXA5 334 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 EGR1P18146 543 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 TMPRSS3P57727 454 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 NKX6-1P78426 367 aaPredicted RBP11.42□□□□□ -0.58
UBE4B-206ENST00000466379 FAM74A1Q5RGS3 127 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 FIP1L1Q6UN15 594 aaKnown RBP11.42□□□□□ -0.58
UBE4B-206ENST00000466379 BOLLQ8N9W6 283 aaKnown RBP11.42□□□□□ -0.58
UBE4B-206ENST00000466379 SPERTQ8NA61 448 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 TAAR3PQ9P1P4 343 aa11.42□□□□□ -0.58
UBE4B-206ENST00000466379 LSM5Q9Y4Y9 91 aaKnown RBP11.42□□□□□ -0.58
UBE4B-206ENST00000466379 IGF2RP11717 2491 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 MEX3AA1L020 520 aaKnown RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 F5H0A9 414 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 TEX46H3BTG2 121 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 GPR31O00270 319 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 SPRY3O43610 288 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 ACAA1P09110 424 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF250P15622 560 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 GLRXP35754 106 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 UBA52P62987 128 aaKnown RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 TMEM268Q5VZI3 342 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 SLC35G3Q8N808 338 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 GALNT11Q8NCW6 608 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 CABLES2Q9BTV7 478 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 PARP12Q9H0J9 701 aaKnown RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 ERRFI1Q9UJM3 462 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-206ENST00000466379 PCDHB10Q9UN67 800 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 ZNF835Q9Y2P0 537 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 MEMO1Q9Y316 297 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 SPEF1Q9Y4P9 236 aa11.41□□□□□ -0.58
UBE4B-206ENST00000466379 NMBP08949 121 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 LYL1P12980 280 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 KLF3P57682 345 aaPredicted RBP11.4□□□□□ -0.58
UBE4B-206ENST00000466379 AESQ08117 197 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 SHEQ5VZ18 495 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 MRGPRGQ86SM5 289 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 WFDC8Q8IUA0 241 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 C1orf174Q8IYL3 243 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 LGI3Q8N145 548 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 TPRX1Q8N7U7 411 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 PIGMQ9H3S5 423 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 TAF9BQ9HBM6 251 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 TREM2Q9NZC2 230 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 UBE2J1Q9Y385 318 aaPredicted RBP11.4□□□□□ -0.58
UBE4B-206ENST00000466379 OR2W1Q9Y3N9 320 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 A0A1B0GWJ7 208 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 IGHV3-13P01766 116 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 CD40P25942 277 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 COL10A1Q03692 680 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 KIAA2026Q5HYC2 2103 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
UBE4B-206ENST00000466379 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 OR52M1Q8NGK5 317 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 CNTNAP3BQ96NU0 1288 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 OR2V2Q96R30 315 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 USB1Q9BQ65 265 aaKnown RBP11.4□□□□□ -0.58
UBE4B-206ENST00000466379 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 MRPL37Q9BZE1 423 aaKnown RBP11.4□□□□□ -0.58
UBE4B-206ENST00000466379 TUBD1Q9UJT1 453 aa11.4□□□□□ -0.58
UBE4B-206ENST00000466379 IGHV3OR15-7A0A075B7D8 119 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 H7C1Q1 480 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 MOB1BQ7L9L4 216 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 FAM185AQ8N0U4 392 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 CD177Q8N6Q3 437 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 COQ2Q96H96 371 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 GLS2Q9UI32 602 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 KIF25Q9UIL4 384 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 AUP1Q9Y679 476 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 C16orf97H3BN30 126 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 ATXN7O15265 892 aaPredicted RBP11.39□□□□□ -0.59
UBE4B-206ENST00000466379 HSPA12AO43301 675 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 CD200P41217 278 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 OR3A1P47881 315 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 RND3P61587 244 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 TESK1Q15569 626 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 SMIM21Q3B7S5 101 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 C3orf36Q3SXR2 165 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 ESCO2Q56NI9 601 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 MOGAT3Q86VF5 341 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 OR1L1Q8NH94 360 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 MBNL3Q9NUK0 354 aaKnown RBP11.39□□□□□ -0.59
UBE4B-206ENST00000466379 WIPI2Q9Y4P8 454 aa11.39□□□□□ -0.59
UBE4B-206ENST00000466379 TMEM30CPA0ZSE6 113 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 PGLYRP1O75594 196 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 MBPP02686 304 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 PET100P0DJ07 73 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms