RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ADAP1O75689 374 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 GNG3P63215 75 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 DEFA5Q01523 94 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 IL34Q6ZMJ4 242 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 OR2Z1Q8NG97 314 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 SLAMF9Q96A28 289 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 Q96M66 194 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 OR51I2Q9H344 312 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 HSF4Q9ULV5 492 aa15.74■□□□□ 0.11
CAPN3-209ENST00000466222 TMEM218A2RU14 115 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 SPRY3O43610 288 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 ATG12O94817 140 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 IFNA2P01563 188 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 CSTBP04080 98 aaKnown RBP15.73■□□□□ 0.11
CAPN3-209ENST00000466222 CTSDP07339 412 aaPredicted RBP15.73■□□□□ 0.11
CAPN3-209ENST00000466222 RPS23P62266 143 aaKnown RBP15.73■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF154Q13106 437 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 NKAPLQ5M9Q1 402 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 RRNAD1Q96FB5 475 aaKnown RBP15.73■□□□□ 0.11
CAPN3-209ENST00000466222 METTL9Q9H1A3 318 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 DECR2Q9NUI1 292 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 MTCH1Q9NZJ7 389 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 SPTBN1Q01082 2364 aaKnown RBP15.73■□□□□ 0.11
CAPN3-209ENST00000466222 ROS1P08922 2347 aa15.73■□□□□ 0.11
CAPN3-209ENST00000466222 CDIPTO14735 213 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 PDCD1Q15116 288 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 PRAMEF6Q5VXH4 476 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 ATRAIDQ6UW56 229 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 SVBPQ8N300 66 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 SAT2Q96F10 170 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-209ENST00000466222 MICU1Q9BPX6 476 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 RTL8AQ9BWD3 113 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 MMP26Q9NRE1 261 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 SDCBPO00560 298 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-209ENST00000466222 HTR3BO95264 441 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 RSU1Q15404 277 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 FAM76BQ5HYJ3 339 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF826PQ6ZT77 177 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 SCCPDHQ8NBX0 429 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 CLRN3Q8NCR9 226 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 NARS2Q96I59 477 aaKnown RBP15.72■□□□□ 0.11
CAPN3-209ENST00000466222 PLK3Q9H4B4 646 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF442Q9H7R0 627 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 UFSP2Q9NUQ7 469 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 PLEKHJ1Q9NW61 149 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 IL36RNQ9UBH0 155 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 RNF115Q9Y4L5 304 aa15.72■□□□□ 0.11
CAPN3-209ENST00000466222 OR5B21A6NL26 309 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 BCL3P20749 454 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 GLRA1P23415 457 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 DTYMKP23919 212 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 ASCL4Q6XD76 172 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 SGPP2Q8IWX5 399 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 OR10C1Q96KK4 312 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 SLC5A7Q9GZV3 580 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 ZNF701Q9NV72 531 aaPredicted RBP15.71■□□□□ 0.11
CAPN3-209ENST00000466222 CISD1Q9NZ45 108 aaKnown RBP15.71■□□□□ 0.11
CAPN3-209ENST00000466222 OR5AC2Q9NZP5 309 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 PRELID1Q9Y255 219 aa15.71■□□□□ 0.11
CAPN3-209ENST00000466222 A0A1B0GWJ7 208 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 PI3P19957 117 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 RAB32Q13637 225 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 PIGYQ3MUY2 71 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 C10orf91Q5T1B1 145 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 ZNF573Q86YE8 665 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 C11orf53Q8IXP5 236 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 CARHSP1Q9Y2V2 147 aaKnown RBP15.7■□□□□ 0.1
CAPN3-209ENST00000466222 DOPEY1Q5JWR5 2465 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 SPTAN1Q13813 2472 aaKnown RBP15.7■□□□□ 0.1
CAPN3-209ENST00000466222 A0A1W2PPR1 153 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 SELENOVP59797 346 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 TSNAXQ99598 290 aaKnown RBP15.7■□□□□ 0.1
CAPN3-209ENST00000466222 ANXA10Q9UJ72 324 aa15.7■□□□□ 0.1
CAPN3-209ENST00000466222 IFNA21P01568 189 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 FAM157CP0CG43 387 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 IGFBP2P18065 325 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 SMCO1Q147U7 214 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 DAZAP2Q15038 168 aaPredicted RBP15.69■□□□□ 0.1
CAPN3-209ENST00000466222 MST1LQ2TV78 715 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 FBXL14Q8N1E6 418 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 ZNF2Q9BSG1 426 aaPredicted RBP15.69■□□□□ 0.1
CAPN3-209ENST00000466222 TMEM204Q9BSN7 226 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 CXXC4Q9H2H0 198 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 LPAR3Q9UBY5 353 aa15.69■□□□□ 0.1
CAPN3-209ENST00000466222 FAM208BQ5VWN6 2430 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 LRP5LA4QPB2 252 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 MSGN1A6NI15 193 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 CRYM-AS1A6NIL9 109 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 TSPAN9O75954 239 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 GABRR1P24046 479 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 DUSP1P28562 367 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 PJVKQ0ZLH3 352 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 TAF9Q16594 264 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 C6orf201Q7Z4U5 140 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 TMED6Q8WW62 240 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 POM121Q96HA1 1249 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 OR2V2Q96R30 315 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 PCDHB16Q9NRJ7 776 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 TENM4Q6N022 2769 aa15.68■□□□□ 0.1
CAPN3-209ENST00000466222 IGHV1-46P01743 117 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms