RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TMEM65Q6PI78 240 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 OR8H3Q8N146 312 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 FAM58AQ8N1B3 248 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 RFKQ969G6 155 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 Q96MT0 163 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 S1PR3Q99500 378 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 ST6GALNAC5Q9BVH7 336 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 GHITMQ9H3K2 345 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 TUBA4BQ9H853 241 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 WARS2Q9UGM6 360 aaKnown RBP11.47□□□□□ -0.57
HDAC6-214ENST00000465269 NUFIP1Q9UHK0 495 aaKnown RBP11.47□□□□□ -0.57
HDAC6-214ENST00000465269 LAMP5Q9UJQ1 280 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.47□□□□□ -0.57
HDAC6-214ENST00000465269 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 DNAH2Q9P225 4427 aa11.47□□□□□ -0.57
HDAC6-214ENST00000465269 MUC4Q99102 2169 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 IGHV1-3A0A0C4DH29 117 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 LINC01619G3V211 115 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 HSPA12AO43301 675 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 SLC2A2P11168 524 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-214ENST00000465269 PPIFP30405 207 aaKnown RBP11.46□□□□□ -0.57
HDAC6-214ENST00000465269 ATP6V1E1P36543 226 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 RAB7AP51149 207 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 EBI3Q14213 229 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 ODF4Q2M2E3 257 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 KRBOX4Q5JUW0 171 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 RFESDQ8TAC1 157 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 CNBD2Q96M20 576 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 ZNF184Q99676 751 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-214ENST00000465269 ADGRL4Q9HBW9 690 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 GLS2Q9UI32 602 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 RAB26Q9ULW5 256 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 COPS3Q9UNS2 423 aa11.46□□□□□ -0.57
HDAC6-214ENST00000465269 DYNC1H1Q14204 4646 aaKnown RBP11.46□□□□□ -0.57
HDAC6-214ENST00000465269 TRAV39A0A0B4J263 110 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 KBTBD11-OT1A0A1B0GTJ5 212 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 ACOD1A6NK06 481 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 SNTNA6NMZ2 147 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 HSD17B6O14756 317 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 OR8U9P0C7N5 309 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 GLP1RP43220 463 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 PITPNAQ00169 270 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 TMED1Q13445 227 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF146Q15072 292 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 CNN2Q99439 309 aaKnown RBP11.45□□□□□ -0.58
HDAC6-214ENST00000465269 TBX5Q99593 518 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 KRTAP4-5Q9BYR2 181 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
HDAC6-214ENST00000465269 DNAH6Q9C0G6 4158 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 TRBV2A0A0J9YWF9 115 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF729A6NN14 1252 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-214ENST00000465269 HSPB6O14558 160 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 SRSF10O75494 262 aaKnown RBP11.44□□□□□ -0.58
HDAC6-214ENST00000465269 IGLV1-51P01701 117 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 IGF1P05019 195 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 DBTP11182 482 aaKnown RBP11.44□□□□□ -0.58
HDAC6-214ENST00000465269 SOX6P35712 828 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 RAB9AP51151 201 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 LAIR2Q6ISS4 152 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 BPIFB6Q8NFQ5 453 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 OR10X1Q8NGY0 326 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 OR2T10Q8NGZ9 312 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 MNTQ99583 582 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 ANKRD60Q9BZ19 345 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 YIPF3Q9GZM5 350 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 TOLLIPQ9H0E2 274 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 EXOSC4Q9NPD3 245 aaKnown RBP11.44□□□□□ -0.58
HDAC6-214ENST00000465269 CALYQ9NYX4 217 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 IKZF2Q9UKS7 526 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 MYRFQ9Y2G1 1151 aa11.44□□□□□ -0.58
HDAC6-214ENST00000465269 RPL36Q9Y3U8 105 aaKnown RBP11.44□□□□□ -0.58
HDAC6-214ENST00000465269 LOC110117498-PIK3R3F6TDL0 507 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 IGLV1-40P01703 118 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 CGB3P0DN86 165 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 CGB7P0DN87 165 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF44P15621 663 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 BCL2L15Q5TBC7 163 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 IZUMO1Q8IYV9 350 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 OR10H4Q8NGA5 316 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 HAVCR2Q8TDQ0 301 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 FBLIM1Q8WUP2 373 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 RFT1Q96AA3 541 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 LGALS12Q96DT0 336 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 MROQ9BYG7 248 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-214ENST00000465269 IDI2-AS1Q9NZ38 188 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF107Q9UII5 783 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-214ENST00000465269 CEPT1Q9Y6K0 416 aa11.43□□□□□ -0.58
HDAC6-214ENST00000465269 IGKV1-12A0A0C4DH73 117 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 CXorf65A6NEN9 183 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF670-ZNF695F2Z2N8 137 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 SH2D1BO14796 132 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 ATP6V0E1O15342 81 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 IGKV1D-12P01611 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms