RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ATP8B1O43520 1251 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 XRCC2O43543 280 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 SNAI2O43623 268 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 LYZL6O75951 148 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 LYPD3O95274 346 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 COX4I1P13073 169 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 NPR2P20594 1047 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 COX5AP20674 150 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 IGHV1-2P23083 117 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 PPIBP23284 216 aaKnown RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 CXCR1P25024 350 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 FASP25445 335 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 FGF9P31371 208 aaPredicted RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 CRISP1P54107 249 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 COPZ1P61923 177 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 PAX2Q02962 417 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 CYLC2Q14093 348 aaPredicted RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 OR1Q1Q15612 314 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 RNF212Q495C1 297 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 PAN3Q58A45 887 aaKnown RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 UTF1Q5T230 341 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 TSPO2Q5TGU0 170 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 ZNF691Q5VV52 312 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 C1orf140Q5VVS0 124 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 C1orf94Q6P1W5 598 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 DHRS4L2Q6PKH6 230 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 TMPRSS11AQ6ZMR5 421 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 CEACAM19Q7Z692 300 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 CALHM3Q86XJ0 350 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 SYS1Q8N2H4 156 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 NUP37Q8NFH4 326 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 OR52E4Q8NGH9 312 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 OR6T1Q8NGN1 323 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 TRUB1Q8WWH5 349 aaKnown RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 UFD1Q92890 307 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 S100PBPQ96BU1 408 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 LRRC58Q96CX6 371 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 DDIT4LQ96D03 193 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 RAB3CQ96E17 227 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 PIK3IP1Q96FE7 263 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 RCHY1Q96PM5 261 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 TNFRSF13CQ96RJ3 184 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 ARHGDIGQ99819 225 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 C7orf50Q9BRJ6 194 aaKnown RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 MED18Q9BUE0 208 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 OSBPL10Q9BXB5 764 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 ACTR6Q9GZN1 396 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 GNB4Q9HAV0 340 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 RETNQ9HD89 108 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 MEPEQ9NQ76 525 aaPredicted RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 TIGARQ9NQ88 270 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 THUMPD1Q9NXG2 353 aaKnown RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 PAQR5Q9NXK6 330 aaPredicted RBP3.26□□□□□ -1.89
UBR4-209ENST00000465036 NDE1Q9NXR1 346 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 CLEC2DQ9UHP7 191 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 COPS3Q9UNS2 423 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 HDGFL3Q9Y3E1 203 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
UBR4-209ENST00000465036 DNHD1Q96M86 4753 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 MTORP42345 2549 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 ITPR3Q14573 2671 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 A0A087WUJ7 227 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 A0A0B4J2E0 115 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 IQCMA0A1B0GVH7 501 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 A0A1B0GX12 115 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 DPRXA6NFQ7 191 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 RNF212BA8MTL3 300 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 SMLR1H3BR10 107 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 KPNA4O00629 521 aaPredicted RBP3.25□□□□□ -1.89
UBR4-209ENST00000465036 SC5DO75845 299 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 ATP5HO75947 161 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 BRI3O95415 125 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 AHSA1O95433 338 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 FADS2O95864 444 aaKnown RBP3.25□□□□□ -1.89
UBR4-209ENST00000465036 BGLAPP02818 100 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 OCMP0CE72 109 aaPredicted RBP3.25□□□□□ -1.89
UBR4-209ENST00000465036 MGMTP16455 207 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 CTRB1P17538 263 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 PSMB1P20618 241 aaKnown RBP3.25□□□□□ -1.89
UBR4-209ENST00000465036 SERPINA2P20848 420 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 PRKACGP22612 351 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 CRYGSP22914 178 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 GRPRP30550 384 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 FCGR2CP31995 323 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 OR1E2P47887 323 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 CDC34P49427 236 aaPredicted RBP3.25□□□□□ -1.89
UBR4-209ENST00000465036 GSK3BP49841 420 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 NUDT2P50583 147 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 GNGT1P63211 74 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 SLC35A1P78382 337 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 ADARB1P78563 741 aaKnown RBP3.25□□□□□ -1.89
UBR4-209ENST00000465036 ZNF154Q13106 437 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 GNMTQ14749 295 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 OXA1LQ15070 435 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 TNXAQ16473 311 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 NRF1Q16656 503 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 DGUOKQ16854 277 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 ECSCRQ19T08 205 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 RPEL1Q2QD12 228 aa3.25□□□□□ -1.89
UBR4-209ENST00000465036 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms