RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 COQ2Q96H96 371 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CMTM3Q96MX0 182 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 TBX15Q96SF7 602 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 FAAP24Q9BTP7 215 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CLEC7AQ9BXN2 247 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 KCNK15Q9H427 330 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CALYQ9NYX4 217 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 IDI2-AS1Q9NZ38 188 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 GNG12Q9UBI6 72 aa5.24□□□□□ -1.57
SF3B1-206ENST00000462613 AMMECR1Q9Y4X0 333 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-206ENST00000462613 CSMD1Q96PZ7 3565 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 MTORP42345 2549 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 IGHV3OR16-10A0A075B7F0 116 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 A0A0B4J203 849 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 CENPVL3A0A0U1RRI6 287 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 MEX3AA1L020 520 aaKnown RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 MEIOCA2RUB1 952 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 FAM25AB3EWG3 89 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 FAM25CB3EWG5 89 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 FAM25GB3EWG6 89 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF701M0R085 212 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 SDCBPO00560 298 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 NPFFO15130 113 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 SOCS1O15524 211 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 RGS5O15539 181 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 HSPA12AO43301 675 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 TCF21O43680 179 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 AVPP01185 164 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 APOA1P02647 267 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 MT-ND4P03905 459 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 ARG1P05089 322 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 IGHV4-38-2P0DP08 117 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 HIST1H1DP16402 221 aaKnown RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 HOXB4P17483 251 aaPredicted RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 COX7A1P24310 79 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 IL3RAP26951 378 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 TGFBR1P36897 503 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 KIR2DS4P43632 304 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 KIR2DS1Q14954 304 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 PNLIPRP3Q17RR3 467 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 MIDNQ504T8 468 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM69Q5SWH9 247 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 SIGIRRQ6IA17 410 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 PDZD9Q8IXQ8 264 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 PNKDQ8N490 385 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 SAMD12Q8N8I0 201 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 OR52M1Q8NGK5 317 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 OR13A1Q8NGR1 328 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 OR9G1Q8NH87 305 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 NDNFQ8TB73 568 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 C15orf40Q8WUR7 153 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 TNFRSF14Q92956 283 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 GALMQ96C23 342 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 ARHGAP5-AS1Q96IT6 56 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 SULT4A1Q9BR01 284 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 PECRQ9BY49 303 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 NAA50Q9GZZ1 169 aaKnown RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM133Q9H2Q1 129 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 DPAGT1Q9H3H5 408 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 ZMAT3Q9HA38 289 aaKnown RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 ABCB10Q9NRK6 738 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 COMMD3Q9UBI1 195 aa5.23□□□□□ -1.57
SF3B1-206ENST00000462613 RSL24D1Q9UHA3 163 aaKnown RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 TBL2Q9Y4P3 447 aaKnown RBP5.23□□□□□ -1.57
SF3B1-206ENST00000462613 FN1P02751 2386 aaKnown RBP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 IGHV2-26A0A0B4J1V2 119 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 RNASEK-C17orf49H0YIS7 233 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 TRIM77I1YAP6 450 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 RAB27BO00194 218 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 FSHBP01225 129 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 GNB3P16520 340 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 OMGP23515 440 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 HTR1DP28221 377 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 SSTR5P35346 364 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 SAA4P35542 130 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 CBX5P45973 191 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 EFNB2P52799 333 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 DLX6P56179 175 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 HLA-DRB3P79483 266 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 KLRD1Q13241 179 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 LTC4SQ16873 150 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 Q3ZCU0 254 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 CDNFQ49AH0 187 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 MINOS1Q5TGZ0 78 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 PRAMEF5Q5TYX0 476 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 CCDC144NLQ6NUI1 221 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 BRD3OSQ6XYD6 125 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 C1orf229Q6ZS94 237 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 C9orf139Q6ZV77 190 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 GAPTQ8N292 157 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 ABHD12Q8N2K0 398 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 Q8N7P7 452 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 OR11H6Q8NGC7 330 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 OR5H6Q8NGV6 325 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 OR10X1Q8NGY0 326 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 RFESDQ8TAC1 157 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 MRPL30Q8TCC3 161 aaKnown RBP5.22□□□□□ -1.57
SF3B1-206ENST00000462613 IL1F10Q8WWZ1 152 aa5.22□□□□□ -1.57
SF3B1-206ENST00000462613 EDARADDQ8WWZ3 215 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms