RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PINX1Q96BK5 328 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 GPR146Q96CH1 333 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF837Q96EG3 531 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 RCC1LQ96I51 464 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 IMMP1LQ96LU5 166 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 SIGLEC12Q96PQ1 595 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ALKBH3Q96Q83 286 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 OR5B12Q96R08 314 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BNQ99877 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HIST1H2BMQ99879 126 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 AGMATQ9BSE5 352 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PSMG3Q9BT73 122 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CABLES2Q9BTV7 478 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PHF7Q9BWX1 381 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PARD6GQ9BYG4 376 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 CALHM2Q9HA72 323 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 SH2D2AQ9NP31 389 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 LIN7CQ9NUP9 197 aaKnown RBP3.02□□□□□ -1.93
COL8A1-204ENST00000462604 UFSP2Q9NUQ7 469 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM242Q9NWH2 141 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 P4HTMQ9NXG6 502 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PSENENQ9NZ42 101 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 NAT8Q9UHE5 227 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 VAX2Q9UIW0 290 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 PITPNC1Q9UKF7 332 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 KCNS2Q9ULS6 477 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 GAB2Q9UQC2 676 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 HS3ST3B1Q9Y662 390 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 ATP23Q9Y6H3 246 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 BRCA2P51587 3418 aa3.02□□□□□ -1.93
COL8A1-204ENST00000462604 TRBV24-1A0A075B6N3 115 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV1D-13A0A0B4J2D9 117 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1W2PQM1 296 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 MAP1LC3B2A6NCE7 125 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF716A6NP11 495 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ANKRD30BLA7E2S9 258 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 FAM90A26D6RGX4 464 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 NPIPB11E5RHQ5 1161 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 H3BP45 60 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 H7BYZ3 331 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SLC33A1O00400 549 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 HSPB6O14558 160 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 DVL1O14640 695 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 EREGO14944 169 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TNFSF12O43508 249 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SYNGR2O43760 224 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CYTIPO60759 359 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 NDUFS6O75380 124 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 MRPL33O75394 65 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 NXPH3O95157 252 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SYNGR4O95473 234 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM50AO95807 157 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 MBP02144 154 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TRGC2P03986 189 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 UMODP07911 640 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SOD3P08294 240 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CELA3AP09093 270 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 MMP7P09237 267 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 WNT2P09544 360 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SCTP09683 121 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 METTL15P1P0C7V9 234 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PATE4P0C8F1 98 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TRGC1P0CF51 173 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV1-13P0DP09 117 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 COX5BP10606 129 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 IAPPP10997 89 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PSG2P11465 335 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 GDF1P27539 372 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 DDTP30046 118 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PSMB3P49720 205 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 GPM6AP51674 278 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ELLP55199 621 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 B3GALT5-AS1P59052 145 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ERVFRD-1P60508 538 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 RAB4BP61018 213 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ARF1P84077 181 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SERF2P84101 59 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PLP2Q04941 152 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SLC38A11Q08AI6 406 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TRA2AQ13595 282 aaKnown RBP eCLIP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 RNPS1Q15287 305 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ADIRFQ15847 76 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM241Q24JQ0 296 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 LRRC75BQ2VPJ9 315 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CEACAM21Q3KPI0 293 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PDZD11Q5EBL8 140 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 LYSMD4Q5XG99 296 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 FAM90A2PQ658T7 463 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SP5Q6BEB4 398 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 LCN15Q6UWW0 184 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 Q6ZPA2 131 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 COLCA1Q6ZS62 124 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CYP2G1PQ6ZSU1 146 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SSX9Q7RTT3 188 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 REC114Q7Z4M0 266 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 YRDCQ86U90 279 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 GGNQ86UU5 652 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 RPS19BP1Q86WX3 136 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF573Q86YE8 665 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CALHM1Q8IU99 346 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms